| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2445 |
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| Symbol | |
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| ID | 4279356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2911180 |
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| End bp | 2912535 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135241 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_751128 |
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| Protein GI | 114563615 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.959093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCAATTTA CCGATTTTTC GTTGGACAAG CGCCTGCTTG ACAGTCTAAA GCACCTTGGC
ATTTCTACGC CTACCGATGT TCAAGCGCAA GCACTTCCCA TTGCCTTATC AGGTAAAGAT
TTAATGGCAT CGTCTAAAAC CGGCTCAGGT AAAACCTTAG CGTTTTTATT GCCAGCAATG
CAACGCGTGA TATCCACCAG AGCATTGTCG AAAAAAGATC CTCGGGTACT TATCTTGTTA
CCGACTCGTG AATTAGCCCA GCAAGTTTAT GGCCAATTAC GTTTATTAGT CGCCAATACC
CAATATAAAG CCATTAGCGT GCTCGGCGGT GAGAACTTTA ACGACCAAGC CAAAGCATTG
GCCAGAGATC CACACTTCAT TGTTGCCACA CCGGGACGTA TTGCGGATCA CTTACAGCAA
CGCCACTTAT ATTTAAATGG TTTAGAATTA CTGGTTCTTG ACGAAGCTGA CCGTATGCTC
GATTTAGGTT TTGCTCCACA GCTCAAAGCC ATTAACGATG CAGCTGATCA TAAACGTCGT
CAAACCTTAA TGTTTTCAGC AACATTAGAT CACAACAGTA TTGGTGATAT TGCGACAACA
TTACTAAAAT CACCGAGCCA TGTGTCTATT GGTGAATCTT ACACTGAGCA TAAAGATATT
GAGCAACGTA TTATTTTGGT TGATCACTTA GACCATAAAC AAGCGGTGTT GCAACATATC
TTAAGCCAAG AAACACATAA GCAAGTGATT GTATTTACTG CAACTCGATC AGATACAGAC
CGTTTAGCCA CGTTATTGGC TGCTCAAGGC TTTGCCACCT CCGCACTCAG TGGTGATTTA
AAGCAATCTG CTCGTAACCA GATAATGGAT CAATTTGCTC GCGGCCAATC GCAGATATTA
GTCACTACCG ATGTTGCATC GCGCGGGCTT GATTTAATCA ACGTATCATT AGTGATTAAC
TTTGATATGC CAAAGTTTGC TGAAGAGTAC GTCCATCGAA TCGGCCGTAC AGGCCGTGCA
GGCGCTAAAG GTGATGCAGT TTCATTTGTA GGCCCTAAAG ATTGGGACAG CTTTAAAAAG
GTACAACTGT TTTTACGTAA AAACTTTGAG CCGACTGTAA TTGAAGGCCT AAAAGCCAAA
TTTAGCGGCC TCAGAGATAA ACCTCAAGCA GGTAAAGCTG GCACGAGTGC AAAAGCAGAT
GTCGTCAGTA AACGAGTTAG CGCGCCTAAA AAAGCTAAAG CGGCACCAAA GAGTGATAAA
CGCTTTATTA CTGGCGTCGA TGTCGGTGAT GCACCAGTGC GCCGTAAAGT TAAGCCTATT
GTCATAATCG AAGACGACGG CACAACAGAA GACTAA
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| Protein sequence | MQFTDFSLDK RLLDSLKHLG ISTPTDVQAQ ALPIALSGKD LMASSKTGSG KTLAFLLPAM
QRVISTRALS KKDPRVLILL PTRELAQQVY GQLRLLVANT QYKAISVLGG ENFNDQAKAL
ARDPHFIVAT PGRIADHLQQ RHLYLNGLEL LVLDEADRML DLGFAPQLKA INDAADHKRR
QTLMFSATLD HNSIGDIATT LLKSPSHVSI GESYTEHKDI EQRIILVDHL DHKQAVLQHI
LSQETHKQVI VFTATRSDTD RLATLLAAQG FATSALSGDL KQSARNQIMD QFARGQSQIL
VTTDVASRGL DLINVSLVIN FDMPKFAEEY VHRIGRTGRA GAKGDAVSFV GPKDWDSFKK
VQLFLRKNFE PTVIEGLKAK FSGLRDKPQA GKAGTSAKAD VVSKRVSAPK KAKAAPKSDK
RFITGVDVGD APVRRKVKPI VIIEDDGTTE D
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