| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2444 |
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| Symbol | |
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| ID | 4279355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2910061 |
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| End bp | 2910999 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135240 |
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| Product | patatin |
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| Protein accession | YP_751127 |
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| Protein GI | 114563614 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAGC TCACCGTGGG ATTAGCGCTA GGCAGTGGAG CCGCTAAAGG TTGGGCACAT
ATTGGGGTAT TGAATGGTTT AGCCAAGTTA GATATTTATC CTGACAAAGT GGCAGGTTGT
TCGGTAGGGG CATTAGTGGG TGCTGCCTAT GCCAATAATC ATTTGGGTGA ACTTGAAACC
TGGGTGAGTG GATTTTCGAG TTGGGATGTA CTTGGGTTAA TGGATTTAGG TTGGCGTAAA
GGTGGCTTAA TTAGCGGCGA GAAAGTATTT GATGTGTTAG CCAATCGCAT TGGCGATATT
GATATTGAAC AGTTAAACCG TCCCTTTGCT GCAGTGGCTA CCGATTTATA TTCTGGGCAA
GAGATTTGGT TTAAAGAAGG TGATTTACGC CATGCTGTTA GGGCTTCATG TTCAATGCCA
GGTTTTTTAC CCCCAGTACA GCAAGGGCAT CGCTGGGTTG TTGACGGTGC GGTAGTGAAC
CCTGTACCTG TATCACTGGC TCGATCTATG GGCGTTGATG TGGTTATTGC GGTGGATTTA
AATGGTCATC GTCGTGGCCA AATGCACTTA ATCCCAGAGC AAGTAAAAAG CCGCAAAGCC
TCTAAGTCTG AACCTATTGA TGAAAAGCGC GAACTTGAAT CTGGCTTTAT GGATTTATGG
GGTAAAGGCA AAGATTACAT GAATGGCTTA ACCGATAAAT TTTCTTTGGG GAGTTCAAAG
TCGCATCCGG GTATGCTGGC GGTGATGTCG CAATCGATGG ATATTTTAGA ACAACGCCAT
AAACGTTCAC GTTTAATGGG CGAGCCACCT GATATTTGTA TCGTGCCTGA TGTGGGTGAC
ATTGGTACCA TGGAGTTTCA TCGCGCTAAA GAAGCGATTA AAGCCGGTGA GCAAGCCGTA
AATGATATTA AGCATTTAAT CGAAGCAACC TTAAAGTAA
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| Protein sequence | MTKLTVGLAL GSGAAKGWAH IGVLNGLAKL DIYPDKVAGC SVGALVGAAY ANNHLGELET
WVSGFSSWDV LGLMDLGWRK GGLISGEKVF DVLANRIGDI DIEQLNRPFA AVATDLYSGQ
EIWFKEGDLR HAVRASCSMP GFLPPVQQGH RWVVDGAVVN PVPVSLARSM GVDVVIAVDL
NGHRRGQMHL IPEQVKSRKA SKSEPIDEKR ELESGFMDLW GKGKDYMNGL TDKFSLGSSK
SHPGMLAVMS QSMDILEQRH KRSRLMGEPP DICIVPDVGD IGTMEFHRAK EAIKAGEQAV
NDIKHLIEAT LK
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