Gene Sfri_2441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2441 
Symbol 
ID4279352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2905481 
End bp2906719 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content45% 
IMG OID638135237 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_751124 
Protein GI114563611 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0420903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATA CCATTTTCAC ACCATACACC TTGAGCAATG GTGCAGTCAT TTCCAATCTA 
TTGGTCAAAG CCGCAATGGA AGAAAACCTC GCCAATACCT TGCAACAACC AGACGATGCA
TTGTTCAACT TGTATGAAGC ATGGGCAAAA GGCGGTGTCG GATTAATGAT CACCGGTAAT
GTGATGATTG ATCCCTTAGC CATGACAGGT CCTGGCGGAG TAGTATTAGA TCCCAACAGC
GCACTTGAGC CGTTCACCCA ATGGGCCAAA AAAGCTAAGC AAAATAACGC CAGAATATGG
ATGCAAATCA ATCATCCAGG CCGTCAGGTG TTTAAAGCGA TGGGCGGTAA AAATCTAGCC
CCTTCTGCCA TCGCACTCGA TTTAGGCAAA CACTCATCCA TGTTCTCTCA ACCAAAAGCG
ATGACAACAG CAGACATTGA AGAGGTTATC CAACGGTTTG CTACCACAGC ACAATTGGCT
CAACAAGCTG GGTTTGATGG AGTACAAATT CATGCCGCAC ACGGATACTT GCTGGCTCAA
TTTTTATCGC CGCTAACCAA TATACGTAAT GACCAATGGG GCGGAAAGCT TGAAAATCGT
GCCAAGTTAT TACTCGAAGT GGTTAAGCAA GTAAGACTTA AATGTGGTGC CGATTTCGAC
ATAGCAGTAA AACTCAACTC TGCCGATTTC CAACGCGGTG GCTTTGATGT CGACGACGCC
GAAAAGGTCA TTAATATGTT GGCACAATTT CAAGTTGAAA TGGTCGAATT ATCTGGTGGC
AGCTACGAGG CACCAGCCAT GCAAGGTCGC AGTGCTGATG AACGAACGTT AGCTCGAGAG
GCTTATTTTT TAAGTTTAAC AGCGCAGTTG GTCCAGCGTA GCCCTATTCC ATTAATGCTA
ACGGGAGGTA TTCATCGCCT ACCTGTGGCT CAACAAGTTA TTGATGCTGG TTTTGCATTG
TGTGGTATCG CTAGCGCCCT CGCCTTCTAT CCCGACTTAG CCAATAGATG GCAAATTCAG
CCAGAGTTTG TCCCGTCAAT TCCAACAGTC AATTGGCAGA GTAAACCTTT GGCTGGACTG
GCGACGATGG CCGTTATTAA ACGTCAGCTT CGCCGCATAA GCCAAGGTAA GCAGCCACAC
ACTAATGATT CACCATTGTG GAGTTTATTA ATCGATCAAT ATAAAACTAA ACAGCGCACT
AAACGTTATC GCCATATTGT AGGTCTTTTT AATCATTAA
 
Protein sequence
MANTIFTPYT LSNGAVISNL LVKAAMEENL ANTLQQPDDA LFNLYEAWAK GGVGLMITGN 
VMIDPLAMTG PGGVVLDPNS ALEPFTQWAK KAKQNNARIW MQINHPGRQV FKAMGGKNLA
PSAIALDLGK HSSMFSQPKA MTTADIEEVI QRFATTAQLA QQAGFDGVQI HAAHGYLLAQ
FLSPLTNIRN DQWGGKLENR AKLLLEVVKQ VRLKCGADFD IAVKLNSADF QRGGFDVDDA
EKVINMLAQF QVEMVELSGG SYEAPAMQGR SADERTLARE AYFLSLTAQL VQRSPIPLML
TGGIHRLPVA QQVIDAGFAL CGIASALAFY PDLANRWQIQ PEFVPSIPTV NWQSKPLAGL
ATMAVIKRQL RRISQGKQPH TNDSPLWSLL IDQYKTKQRT KRYRHIVGLF NH