| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2440 |
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| Symbol | |
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| ID | 4279351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2902797 |
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| End bp | 2905274 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135236 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_751123 |
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| Protein GI | 114563610 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000351973 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCAT TACGTTTATC TCTACTTGCC CTTGCTTGTC AAAGTGTATT GTTTCCCGTT
TATGCTCACG CACAAACACC AGTTGCCCAA TCTGAGGTTG CTGCACAATC TTCAAATGAT
ACGGCCAATG AATCACCCTC AGCCAGCTAT GAACGAATAA CGGTTTATGG CCGACAAAAC
CAAGTAGTGA TGAACTCAGG TTTAGCAACC AAATCTGATA TGTCGCTGAT GGAAACGCCT
GCGGCGGTAG TGATTGTTGA TGAAGCATTA ATTGATGCGC AAGGCATCAC CAACATGCAA
GATTTAGTTC GTAATATCAG CGGCGTAACC CAAGCGGGTA ATAATTATGG TATTGGCGAC
AATTTAGTTG TTCGCGGATT AGGCGCCAAC TACACCTACG ATGGTATGTA TGGCGGTGCA
GGATTAGGTA ACACCTTTAA TCCAACTCGT TCGCTAACCA ACGTGAGTTC TGTTGAAGTA
CTCAAAGGCC CTGCCACTGG TCTATATGGT ATGGGCAGCG CGGGTGGCGT GATTAACCTT
ATTGAGAAAA AACCTCAATT TGACAGTAAA CAGTTGTTTG AAGCTGAAGT GGGTCAATGG
GATAGTTATT CTCTCATGGC TGATTCTACG GGCGGAATAA CTGACGATTT AGCCTATCGC
CTCGTGGCAA AAACGGCTCG TAGTACAGGT TATCGAGATC TTGGTACCGA CCGCGATGAA
ATATACGGCT CGCTTAAATA TGTATTGAAT GAAAACCAAA ATATTATGCT ATCAACAGCA
TATATTAGCG ATGCGATCCC CGTTGATTCA ATCGGCCATC CTATCCGCAT TTATAACGCA
GCTTCAGTCG ATGGGAAAAC CGCTGGTGAA GTCAGCTGGC AAGACTTAGT CAACGACCCT
ACCAGTAAGG GTTTACAACT AACAGACGAT CAGCGCCAAC AATTAACCGA CTCGTTAAGC
GCAAATGATG GCCTAACACC GTATGAGTTT GGTCATAACG GTCTTATTTC TCCAATGGCG
AAAGACAATG AAGGCGAAGA GTTGCGCTTT AAACTAAGCC ATAATGTGTA CTTAACCGAT
GACTTATTTT TAAACCAACA ACTGCAATAC CGTAATTACG AAACCAGTTT TGCTCGTCAA
ACAGGGGCTT ACAACTATGT TTACTGGCAA CGTAGTGGCG TAATTAACGC CGACCCACGC
GCACCTTTGG TTGAAGATGG CACCCTATAT CCATATGCAG CTCGTCGTCA GGAATACCGC
AAAGTCTCGG CAGAAGAAAA GTCATGGCAG TATTTTGCCG ACTTACGTTA TGACTTCGAC
ATTGGCAATA TCAGTAACGA ATTATTAGTT AATGCTAACT TTGAAGATCG CGATATTCGC
TTTAAACAGT ATTCAATTTA CGACGCAGAT TACACCTTGA AAGATTCCGA TGGTAATTTG
TCATATCAAG GTTCGCTACC GTATATTTAT GATATCCGTA ACCCAAATTG GGGCGAAGGT
GAATTTGAAG ACTACGATCC ATTATTAACC AGTAACTACA ATAAATCTGT CACAGCTTGG
GGCTTGGGCT TACAACATGT GGGTTATTTA GGTGGCGGAT TTACTAGCCG TATTGGTGTC
GCATTCAATG AAATTAAACA AAGTTATGAA CACTTGGGTG TCGATGCTCG TTACAGTAGT
AGCTTAGCAG ACCCTCAACC AGAAGCGGAT ACCACAGATA ACGGTGTAAC CTACAATTTA
GGCCTAACTT ATATGCCTAC TGACGATATC TCTATTTTCG TGAATCATTC TAAAGGCCGT
ACAGCATACA GTGTGTTAGG CGATGTAACA GGCAATGAAG CAGACCGTGA AGATTCTCAG
TCGATCAGTA ATGATTTAGG TATTCGTGCC AAAGCATTTG ATGATCAATT GCTCGCATCT
TTGGTCTTTT TCAAAACATC ACGTACTAAT GTGGCTTATA CCAATCCAGA ATACGAAAGC
AGCGAAGCAA CACCTGATAT CTTCCCGTAT TTTTACGACG GCAGCGAAGA TACTAAAGGG
GTGGAGCTAG ATCTGAATGC ATATTTAAGT GACCAATGGA AAGTCAACGT TAACGCGGTT
TACCAAGATG CTAGAGACAA TCAAAATCCA AATAGCAGTG ATTATGGCCA ACGCCAAAAA
GGTGTACCTT ACGTCACAGC GGGCGCTTGG GTAACTTATG CCGCAGAATT TGGCTTACCA
GCACCGGTAT CAATCAGTCT TGGGGCTAAA TATGTCGATG AACGCAGCAC ACACTCTAGC
TCATTTGGTA TTCCAGATGG TTATGTGCCA AGTTATACGG TAATCGATTC AGCGATTAGT
TATGACGTTG AAAGTTATAA AATCCAATTG AACATTAATA ACTTATTTAA TGAAACATAT
TACGATAAGG CGATGTTCTT AGGCGGATTA CCCGGCGAAG AGCGTAATGC GAAGTTAACC
CTAACTTATC GTATTTAA
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| Protein sequence | MTPLRLSLLA LACQSVLFPV YAHAQTPVAQ SEVAAQSSND TANESPSASY ERITVYGRQN
QVVMNSGLAT KSDMSLMETP AAVVIVDEAL IDAQGITNMQ DLVRNISGVT QAGNNYGIGD
NLVVRGLGAN YTYDGMYGGA GLGNTFNPTR SLTNVSSVEV LKGPATGLYG MGSAGGVINL
IEKKPQFDSK QLFEAEVGQW DSYSLMADST GGITDDLAYR LVAKTARSTG YRDLGTDRDE
IYGSLKYVLN ENQNIMLSTA YISDAIPVDS IGHPIRIYNA ASVDGKTAGE VSWQDLVNDP
TSKGLQLTDD QRQQLTDSLS ANDGLTPYEF GHNGLISPMA KDNEGEELRF KLSHNVYLTD
DLFLNQQLQY RNYETSFARQ TGAYNYVYWQ RSGVINADPR APLVEDGTLY PYAARRQEYR
KVSAEEKSWQ YFADLRYDFD IGNISNELLV NANFEDRDIR FKQYSIYDAD YTLKDSDGNL
SYQGSLPYIY DIRNPNWGEG EFEDYDPLLT SNYNKSVTAW GLGLQHVGYL GGGFTSRIGV
AFNEIKQSYE HLGVDARYSS SLADPQPEAD TTDNGVTYNL GLTYMPTDDI SIFVNHSKGR
TAYSVLGDVT GNEADREDSQ SISNDLGIRA KAFDDQLLAS LVFFKTSRTN VAYTNPEYES
SEATPDIFPY FYDGSEDTKG VELDLNAYLS DQWKVNVNAV YQDARDNQNP NSSDYGQRQK
GVPYVTAGAW VTYAAEFGLP APVSISLGAK YVDERSTHSS SFGIPDGYVP SYTVIDSAIS
YDVESYKIQL NINNLFNETY YDKAMFLGGL PGEERNAKLT LTYRI
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