| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2436 |
|---|
| Symbol | |
|---|
| ID | 4279347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 2899974 |
|---|
| End bp | 2900366 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638135232 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_751119 |
|---|
| Protein GI | 114563606 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4628] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00639773 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAG CAAACAATCC GCTTCACGGC ATTAAACTAG AAACTATCGT TACTCAACTT
GTAGAAAAAT ACGGCTGGGA AGAATTAGGA TCTAGGATAA ACATTCAGTG TTTTAAAGAT
AATCCGAGTG TAAAATCAAC CTTGAAGTTT TTACGTAAAA CGCCCTGGGC TCGCGACAAA
GTTGAATACT TGTATCTTAA AGCAAACAAG TTACCATTGC CGCCGCCAAA AGAAGACAGC
CGTGGCTCTT TTTCAGCTAA ATCTCGGCCA GCCAAAGCCA AAGTGACCGC AGCTAAGCCT
GCTGCAAATA AAGTCGTTTC AGCTAAAGCT AGCTCAGAGA TTGCATCGAC AGAACCTGTG
AATGCCAATA TTTGGGGATC GAGCTCAAAT TAG
|
|---|
| Protein sequence | MTQANNPLHG IKLETIVTQL VEKYGWEELG SRINIQCFKD NPSVKSTLKF LRKTPWARDK
VEYLYLKANK LPLPPPKEDS RGSFSAKSRP AKAKVTAAKP AANKVVSAKA SSEIASTEPV
NANIWGSSSN
|
|---|
| |