| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2435 |
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| Symbol | |
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| ID | 4279346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2898404 |
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| End bp | 2899864 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135231 |
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| Product | carbon starvation protein CstA |
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| Protein accession | YP_751118 |
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| Protein GI | 114563605 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.338097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTGGT TTTTACTCTG TGTAGGCCTG CTAATTGGTG GCTATTTTAT TTATGGCGCT
TTTGTCGAAA AAGTGTTCGG CATTAACACT CAAAGACAAA CGCCCGCTTT CACTCAAACA
GACGGTGTCG ACTTCGTACC GATGTCTAAA GGGAAAGTCT ATTTAATTCA ATTGTTAAAC
ATTGCTGGTG TCGGTCCAAT TTTTGGCCCA ATTCTAGGTG CCCTTTATGG CCCAGCGGCG
ATGCTATGGA TTGTATTTGG TTGTATTTTT GCCGGTGCAG TGCACGATTA CTTTTCGGGG
ATGTTATCGG TACGCAATAA TGGTCAATCA GTTCCTAACT TGGCCGGTAA ATACTTAGGT
AACAACGCCA AGCACTTTAT GAACTTGTTT GCCATTATCT TATTGTTACT AGTTGGCGTA
GTGTTTATCT CTGCTCCTGC AGGATTACTA AGCAAACTTA CCGGACTGGA TGTCACTCTC
TTTGTTGGTA TCATTTTTGT TTATTATTTA ATTGCTACCA TCGTACCTAT CGACAAGATT
ATTGGTCGCT TATACCCATT CTTTGGCGCA TTACTGGTCT TTATGTCACT CGGACTGATT
ATAGCGTTAG CATTATCAAC CGAACATACC ATGTTACCTG GTTTTGAAAT GGGTGACTTC
TTTACCAACT TAAACCCTAA TGACATGCCA TTATGGCCAG CCTTATTCAT CACGATTGCA
TGTGGTGCAG TATCGGGTTT CCATGCAACT CAATCACCTT TAATGGCGCG TTGTGTTGAA
AATGAATCAA ACGGTCGCTT TGTGTTTTTT GGTGCCATGA TTGGTGAAGG TGTTATTGCA
TTAATTTGGT GTGCAATTGC ATTATCATTC TTTGGTGGTG TAGAAGGATT GAATGCCGGA
ATGGCAGGCA ACCCAGCAAA CGTTGTGTAC GAAGCATCTA ATGGGCTATT AGGAACATTT
GGTGGCTTCT TGGCTATCTT AGGTGTCATT GTATTGCCTA TCACCTCTGG CGATACAGCA
TTTCGCTCAG CGCGATTAAT ATTGGCAGAG TTCTTTAACA TCAAGCAAAT CGAGTTACCG
AAGCGTTTAA TGCTCGCGTT ACCATTATTT GTCGTCGGTG CCGTGTTAAC CCAAGTAGAC
TTTGGCATTA TCTGGCGCTA CTTTGGTGTT GCAAACCAAA CCACAGCGGT ATTGATGTTA
TGGACCGCTT CAGCTTACTT ACTACGACAC AATAAATTCC ATTGGATTTG TACTGTACCG
GCTATGTTCA TGACCTGTGT TGTGATTAGC TTTATGTTGA ACTCATCAAC ATTGGGTGCT
GGTTTACCAA TGACAGTGTC AACTATTGCA GGTTTAGTCA CTACCGCAAT CATTGCGACA
ATGATTATTA TTAAGACCAA AGGCAAAGGC GATATTGATA CTGACGAAGA AGACAAAGTT
GAACTAGCCA ACGAGTTATA G
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| Protein sequence | MTWFLLCVGL LIGGYFIYGA FVEKVFGINT QRQTPAFTQT DGVDFVPMSK GKVYLIQLLN
IAGVGPIFGP ILGALYGPAA MLWIVFGCIF AGAVHDYFSG MLSVRNNGQS VPNLAGKYLG
NNAKHFMNLF AIILLLLVGV VFISAPAGLL SKLTGLDVTL FVGIIFVYYL IATIVPIDKI
IGRLYPFFGA LLVFMSLGLI IALALSTEHT MLPGFEMGDF FTNLNPNDMP LWPALFITIA
CGAVSGFHAT QSPLMARCVE NESNGRFVFF GAMIGEGVIA LIWCAIALSF FGGVEGLNAG
MAGNPANVVY EASNGLLGTF GGFLAILGVI VLPITSGDTA FRSARLILAE FFNIKQIELP
KRLMLALPLF VVGAVLTQVD FGIIWRYFGV ANQTTAVLML WTASAYLLRH NKFHWICTVP
AMFMTCVVIS FMLNSSTLGA GLPMTVSTIA GLVTTAIIAT MIIIKTKGKG DIDTDEEDKV
ELANEL
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