| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2424 |
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| Symbol | |
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| ID | 4279335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2888594 |
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| End bp | 2889808 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135220 |
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| Product | cysteine desulfurase |
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| Protein accession | YP_751107 |
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| Protein GI | 114563594 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTC CTATCTATTT AGATTATGCC GCAACAACCC CTGTAGATCC GCGTGTCGCA
GAAAAAATGA TGCAACACAT GACAATGGAC GGCGTGTTTG GTAACCCAGC ATCGCGTTCA
CATCGTTATG GTTGGCAAGC AGAAGAGGCG GTTGATGTCG CCCGTAATCA AGTTGCCGAT
TTAATTAATG CTGATCACCG TGAAATAGTC TTCACTTCAG GTGCAACAGA ATCAAGTAAC
CTTGCGATTA AAGGTATTGC CCATTTTTAT CATAAAAAGG GTAAGCATAT TATCACCAGT
AAAACTGAGC ATAAGGCAAC GTTAGACACT TGCCGCCAGT TAGAGCGTGA AGGTTATGAA
GTTACTTACC TTGTTCCTGA TGCTAATGGC ATTATCCCAA TGGAACGTTT AGAAGCGGCG
ATGCGCGATG ACACTATTTT AGTCAGCATT ATGCACGTAA ACAATGAAAT TGGTGTCATC
CATGATATCA ACGCAATTGG TGAATTATGT CGTTCAAAAG GCATCTTTTT CCACATGGAT
GCGGCACAAA GTGCTGGCAA AATACCAATT GACGTTCAAA CCACCAAAGT TGATTTGATT
TCGATTTCTG GCCATAAAAT GTATGGACCA AAAGGTATCG GTGCATTATA TGTTCGCCGT
AAGCCACGTA TTCGTCTTGA ATCGCAAATG CACGGTGGTG GACACGAACG CGGTATGCGC
AGTGGCACGT TAGCAACACA TCAAATCGTC GGTTTAGGTG AGGCAGCTGC TGTTGCTAAA
CAAGACATGG CTGCTGATAG CGCGCGCATT ACTCATCTAC GCGATAAGTT GTGGAACGGT
ATTAAACACA TCGAAGAAAC TTATATCAAC GGTGATATGG AACAACGCTA CAGTGGTATT
TTTAACGTTA GCTTCAACTT TGTTGAAGGC GAGTCGTTAA TGATGGCCTT GAAAGACTTA
GCGGTTTCTT CAGGTTCAGC CTGTACTTCA GCAAGTTTAG AGCCAAGCTA CGTATTACGT
GCCTTGGGTT TAAATGATGA AATGGCACAT AGCTCGATTC GTTTCTCTAT TGGTCGCTTT
ACGACCGATG AAGAAATTGA CCACGCTATC AAAACGATAA CTGAATCTAT CGATAAGTTA
CGTGAAATGT CTCCATTATG GGAGATGTTC AAAGATGGTA TCGATTTAGA GCAAGTTCAA
TGGGCACATC ACTAA
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| Protein sequence | MKLPIYLDYA ATTPVDPRVA EKMMQHMTMD GVFGNPASRS HRYGWQAEEA VDVARNQVAD
LINADHREIV FTSGATESSN LAIKGIAHFY HKKGKHIITS KTEHKATLDT CRQLEREGYE
VTYLVPDANG IIPMERLEAA MRDDTILVSI MHVNNEIGVI HDINAIGELC RSKGIFFHMD
AAQSAGKIPI DVQTTKVDLI SISGHKMYGP KGIGALYVRR KPRIRLESQM HGGGHERGMR
SGTLATHQIV GLGEAAAVAK QDMAADSARI THLRDKLWNG IKHIEETYIN GDMEQRYSGI
FNVSFNFVEG ESLMMALKDL AVSSGSACTS ASLEPSYVLR ALGLNDEMAH SSIRFSIGRF
TTDEEIDHAI KTITESIDKL REMSPLWEMF KDGIDLEQVQ WAHH
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