| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2423 |
|---|
| Symbol | |
|---|
| ID | 4279334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 2888138 |
|---|
| End bp | 2888521 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638135219 |
|---|
| Product | scaffold protein |
|---|
| Protein accession | YP_751106 |
|---|
| Protein GI | 114563593 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
|---|
| TIGRFAM ID | [TIGR01999] FeS cluster assembly scaffold IscU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTATA GCGAAAAAGT AATCGATCAT TATGAAAACC CACGTAACGT AGGTTCATTT
GATAAGAACG ACCCATCAGT AGTCACTGGT ATGGTTGGTG CACCAGCTTG TGGTGATGTA
ATGAAGTTGC AACTTAAAAT TAATGCCGAC GGTATTATTG AAGATGCAAA ATTCAAAACC
TATGGTTGTG GTAGCGCAAT TGCATCTAGC TCATTAGTAA CAGAATGGGT AAAAGGCAAA
AGTGTCGATG AAGCTGCAAC GATTAAAAAT GCAGACATCG CCGAAGAGTT AGCATTGCCG
CCGGTTAAAA TTCATTGCTC AATTTTGGCT GAAGATGCCA TTAAAGCAGC AATTGAAGAG
TATAAAAGCA GACAAGCTAA GTAA
|
|---|
| Protein sequence | MAYSEKVIDH YENPRNVGSF DKNDPSVVTG MVGAPACGDV MKLQLKINAD GIIEDAKFKT
YGCGSAIASS SLVTEWVKGK SVDEAATIKN ADIAEELALP PVKIHCSILA EDAIKAAIEE
YKSRQAK
|
|---|
| |