Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2402 |
Symbol | |
ID | 4279313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2866337 |
End bp | 2867713 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638135198 |
Product | L-serine dehydratase 1 |
Protein accession | YP_751085 |
Protein GI | 114563572 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000825911 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGTG TATTTGACAT GTTCAAAATT GGTATCGGTC CATCTAGCTC ACATACAGTG GGTCCTATGA AGGCAGGTAA AACTTTTATA CAGCATGTCG CTGATAATAA TTTATTAGCG GATACCGACG AGTTACAAAC AGAATTATTT GGATCTTTAG GTCAAACAGG CAAAGGCCAT GGTACCGGTA AAGCGGTCAT TTTAGGGCTA ATGGGTGAAG ACCCAGAAAC CGTAGATACC GATGGGATTG ATGCCATTTT AGACGCAGTG TCTACGACTC AAAAACTCAC CTTAGCAGAC GGACGTCAGG TTAAATTTAC TCGCGAGACT GGGGTAACTT ACCATAGACG CAAAACCTTG CCGGCACATG CTAATGCCAT GACCTTATAC GCATTATCTA AAGGCGAATG CATATACCAG CGTACCTATT ATTCGGTTGG TGGTGGGTTT ATTCTTGATG AAGATGAAAT AACTCAACGT AATGCTTCTC CAGCAACGCC AATTGAACAA GCACCTTATG ACTTCAACAG TGCACTGCAA TTACTGCAAT TGTGCTGCGA CAACGGCTTA AGCATTTCAT CATTAATGAT GGCTAATGAG CTTAGCATTG CCAGTGAAGA TGAGATCAAA CAAGGTTTGT GGAAAATTTG GCAAACCATG AAAAACTGCG TTGAACGCGG TTATCAAAAG GAAGGCATAT TGCCAGGCGG TTTAAAATTA CGCCGACGTG CCCCAGCGCT CTACCGCCGC TTAAAAGCGG AAGGGAGAAA TAACACAGAC CCATTGACCG CTATGGACTG GGTTGATTTA TTTGCTTTAT CGGTTAATGA ACAAAATGCA GCAGGCGATC GCGTTGTAAC TGCCCCAACA AACGGCGCCG CAGGGATTAT CCCGGCAGTA TTGTGTTACT ACGATATGTT TGTGCAAGAA GTCGATATCG ATGTGTGCAG CCGCTATCTG TTAACCGCTG CTGCCATTGG TATTTTGTAC AAGAAAAATG CCTCGATTTC TGGCGCTGAA GTGGGTTGCC AAGGCGAAGT GGGCGTAGCC TGTTCAATGG CAGCCGGTGC GTTAACTGAA ATTATGGGCG GAACCGTAGA ACAGGTTGAG AATGCCGCTG AAATTGGCAT GGAACATAAC TTAGGTTTAA CCTGCGATCC AGTTGGCGGC CTAGTACAAG TGCCTTGTAT TGAACGTAAT GCTATGGGTG CAGTAAAAGC GATTAATGCT TCACGCATGG CACTTCGCGG TGATGGTAAT CACAAAGTGT CTTTGGATAA AGTCATTAAA ACGATGATGG AAACCGGTAG AGACATGCGC AGTAAATACA AAGAAACCGC AAAAGGTGGT CTTGCGGTGA ATATCGTCGA ATGTTAA
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Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGKTFI QHVADNNLLA DTDELQTELF GSLGQTGKGH GTGKAVILGL MGEDPETVDT DGIDAILDAV STTQKLTLAD GRQVKFTRET GVTYHRRKTL PAHANAMTLY ALSKGECIYQ RTYYSVGGGF ILDEDEITQR NASPATPIEQ APYDFNSALQ LLQLCCDNGL SISSLMMANE LSIASEDEIK QGLWKIWQTM KNCVERGYQK EGILPGGLKL RRRAPALYRR LKAEGRNNTD PLTAMDWVDL FALSVNEQNA AGDRVVTAPT NGAAGIIPAV LCYYDMFVQE VDIDVCSRYL LTAAAIGILY KKNASISGAE VGCQGEVGVA CSMAAGALTE IMGGTVEQVE NAAEIGMEHN LGLTCDPVGG LVQVPCIERN AMGAVKAINA SRMALRGDGN HKVSLDKVIK TMMETGRDMR SKYKETAKGG LAVNIVEC
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