| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2401 |
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| Symbol | |
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| ID | 4279312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2865078 |
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| End bp | 2866103 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135197 |
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| Product | beta-hexosaminidase |
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| Protein accession | YP_751084 |
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| Protein GI | 114563571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000799068 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCTATT TAATGATGGA TCTTGCAGGT TTAACTGTAT CTGCAACAGA AACTGCGCAA
TTACAGCATC CGCAGGTAGG TGGCATTATA TTGTTTAGCC GCAACTGTGA AAATAAAAAT
CAATTAATTG AATTGGTTAA AAGTGTTCGC AGTATTCGCC CTGAATTATT AATTGCGGTC
GATCATGAAG GTGGCCGAGT TCAACGTTTT CGTGAAGGTT TTAGTTTAAT ACCTGCCATG
GGTGATATTT TACCTGCTGC TAAAGGCGAT TTAACATTAG CTAAACAATG GGCGAAAGAG
TGCGGGTTTT TAATGGCTGT TGAGCTGTTA GCGTGTGATA TCGATTTAAG TTTTGCACCT
GTCTTAGACG TAAATGGTAT AAGTGAAGTG ATTGGTAAGC GCAGTTTTAG TGCGGTTCCT
GATGAAGTCA GTGCATTAGC ACAGCAGTTC ATCATTGGCA TGAATGAGGC CGGTATGGCT
GCGGTAGGAA AACATTTTCC TGGCCATGGC AGTGTTGCTG CCGATTCACA TATTGCCATG
CCAGTTGATC CAAGGACTAA AGAGCAAGTG GAAGCTTTTG ATATGCAGCC ATTTAAGCAC
TTGATAGGTT CTCAGCAGCT ACAAGGTGTG ATGCCAGCGC ATGTGGTTTA TTCAAATATT
GACCCTAATC CCGCAGGCTT TTCATCTTAC TGGCTACAAA CTATTTTACG TCAACAATTA
GGTTTTGATG GGGTGATTTT TTCTGACGAT TTAGGCATGA AGGGTGCCAG CTTTGCAGGT
AACTACCTTG GCCGTGCTAA GGCGGCGTTA GATGCTGGCT GTGATATGAT TTTGGTCTGT
AATGATTCTG TTGGCGTTAA TGCTTTATTA ACAGAGTTTG ATTGGCCGGC TGCCGAGCCT
ACACATACCG CATTATCGCT AAAAGGTAAT ACTGCACAAG CCTCGCAGGC TCTTGAACAG
CAAACACGTT GGCAAGCTGC TCAGCTATTG GCGATGGATA TCACTCGCAT TGCTCAATCG
TTGTAA
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| Protein sequence | MSYLMMDLAG LTVSATETAQ LQHPQVGGII LFSRNCENKN QLIELVKSVR SIRPELLIAV
DHEGGRVQRF REGFSLIPAM GDILPAAKGD LTLAKQWAKE CGFLMAVELL ACDIDLSFAP
VLDVNGISEV IGKRSFSAVP DEVSALAQQF IIGMNEAGMA AVGKHFPGHG SVAADSHIAM
PVDPRTKEQV EAFDMQPFKH LIGSQQLQGV MPAHVVYSNI DPNPAGFSSY WLQTILRQQL
GFDGVIFSDD LGMKGASFAG NYLGRAKAAL DAGCDMILVC NDSVGVNALL TEFDWPAAEP
THTALSLKGN TAQASQALEQ QTRWQAAQLL AMDITRIAQS L
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