Gene Sfri_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2398 
Symbol 
ID4279309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp2859769 
End bp2860368 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content39% 
IMG OID638135194 
Producthypothetical protein 
Protein accessionYP_751081 
Protein GI114563568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.249611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATACCTG ACAGCAATTC TTATTTTAGT GTGCCTCACC ACTTTAATGT GTACTTAACT 
TCGTGGGATG CAAACCAAGC TTTACCCACA GATGATGAAC TCCGCGACAT GCAATCTGTT 
GGGTTAAAAC TACTGACCGA AGTGAAAAGT CTTGAAGCAA ATTGTTTACT GCAACTGCGC 
AATTTAGACA ATGATGCTAA AGCCGTAGTC GACTTTTTAA AGCTACAATC GCGTAAAGTC 
GATTTAGTAT TGCAACACGT ATTAGAAAAA GAAGTTCAAG ATGGTGAGTT ATTTAAAGGT 
GATCAATTTG GTGGCAGTGG AATTAGTATC ATTTCTTCAC GTCCATTGGT TGTAAATGAA 
CACGTTAAGA CCCACATCTA TTTGCATACA GAATTAGTGG CATTGTTGTG TCTGTGCCAA 
ATACAAAGCT GCACCCCAGT ATCAACAGAT GACGCCACCG AAACCGCATA TTGGCGCTGT 
GAGCTTGAAT TTAGCCAAAT ACTTGAAGAT GATATTGAGC AATTAGTCAA AGCAAGCTTG 
AATGTACAAC AAAAAATGCT CAAAAAACGT AAACAGAATA TCGATAAACA GCGTAGCTGA
 
Protein sequence
MIPDSNSYFS VPHHFNVYLT SWDANQALPT DDELRDMQSV GLKLLTEVKS LEANCLLQLR 
NLDNDAKAVV DFLKLQSRKV DLVLQHVLEK EVQDGELFKG DQFGGSGISI ISSRPLVVNE 
HVKTHIYLHT ELVALLCLCQ IQSCTPVSTD DATETAYWRC ELEFSQILED DIEQLVKASL 
NVQQKMLKKR KQNIDKQRS