Gene Sfri_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2392 
Symbol 
ID4279303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2854552 
End bp2855346 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content42% 
IMG OID638135188 
ProductFAD-binding 9, siderophore-interacting domain-containing protein 
Protein accessionYP_751075 
Protein GI114563562 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAACC AATCAGCTAA AAAATCTCCA ACCCGATTAA CTTATATCAG TGACATTATT 
GAAATAAGCC CTTATTTACG TAGATTGGTG TTGAGTGGCG AGCAACTGGC TAATTTCCCT
GCCGATCAAC AAGGGGCCTA TGTAAAAGTA TTAATACCGC AACCCGGTGA AACCACCGTA
AATATGACGT TAACCGGTCC TAATGCTGCG ATTAAGCGCT CATATACCAT CAGGGAGTTT
GATCCTGTGC GTGGTCAACT TAGCTTAGAT TTTGTGATAA ATAAGCATAC GGGGCCAGCA
ACCGATTGGG CAAAATTAGC TAACGTTGGC GATACCGTCG CAATTGCAGG CCCTGGGCCA
TTAAAAATGA ATCGATTCGA TTTCAATGAC TACTTATTAT TTGGAGATTC CACGTCTATC
AATGCCGTTG ATGCATTGAT AAAGCGGCTT CCCGCCACCG CTAAAGGGCA TATCATCATG
TTGGTGAATA GCCATCAAGA GCAAGCGCTG CTCAGTCAAC ACCCATTATT GAAAACCCAT
TGGTTAGTAC TAAATGACAG TATCACTGCA GAACAACAGA TAGATTGGTT ATTAGATAAA
CTTGAACTCT TTGGTGATTT ACCTGCTGTG ACACAAGTTT TTGTCGGCTT AGAGGCCACC
CAAGTGAGAG TAATAAAGCA ATACTTACTT GAGCAACAAC AATTACCATT AAGTTCAATC
AGTGCTACGG GATACTGGAA GCGAAATACT GATGCTGACA CGTTTGGTAA ACAAAAGCAG
ATGCAGCCGT TGTAG
 
Protein sequence
MNNQSAKKSP TRLTYISDII EISPYLRRLV LSGEQLANFP ADQQGAYVKV LIPQPGETTV 
NMTLTGPNAA IKRSYTIREF DPVRGQLSLD FVINKHTGPA TDWAKLANVG DTVAIAGPGP
LKMNRFDFND YLLFGDSTSI NAVDALIKRL PATAKGHIIM LVNSHQEQAL LSQHPLLKTH
WLVLNDSITA EQQIDWLLDK LELFGDLPAV TQVFVGLEAT QVRVIKQYLL EQQQLPLSSI
SATGYWKRNT DADTFGKQKQ MQPL