Gene Sfri_2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2380 
Symbol 
ID4279291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2836885 
End bp2837727 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content40% 
IMG OID638135176 
Producthypothetical protein 
Protein accessionYP_751063 
Protein GI114563550 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CAACATGGTT AGGTACGATG GCATCAGTTT TATTATTGTC TTCATGCAGT 
ATGCTGGTGA GCCAGCAGTC GGGAAAACAG TCTGTCTCGA GCAGCCTGAT GGACTTTTTG
TATCCTAATA AAGATGACCG TTCAGCACAT AGCGCCGAAG TTCCATTGCT CACATTACCG
GTAAAAGTCG GTATTGCCTT TGTACCGTCT ACAGGCTTTC AAAAAGAGGC CGTGCATAGT
AAGGACCAAT ATGAATTACT TGAAAAAGTG AAAGCGGCTT TTGTCCAATA TGATTATATT
GATCGCATTG AAGTTATTCC GAGTACTTAT CTTGCTGGTG GTGATGGTTT TAACACATTA
GAGCAAGTTG GGCGTTTATA TGATGTCGAC GTAATGGCCT TGGTGTCTTA CGATCAAGTG
ACTCAGTCGG TAGAGAATAA TGCCGCGTTA TTGTATTGGA CAATCGTGGG GATGTATGTG
ATTCCGGGCA ATGAAAATAC CGTACAAACA TTTGTCGATA CGGCAGTATT TGACATTAAA
AGTAGGAAAA TGCTCTTTAG AGCGCCAGGG ATCAGTAAGC TTGAAAAACG CACTACTGCC
ATAGGTATTG ATGAAACCTT AGCAGAAAAA TCGATGCAAG GTTTTGATCT AGCGGTCACT
GATATGACTA AAAACTTAGA TGATGAGTTA GCTCGATTTA AGGTGAGAGT TAAAGAGGAG
AAAATTGCCA AGGTGGAACA TAGTAATAAT TACAGCGGCG GGACAATTGA TATTCGGTTT
GGTTTACTAT TATTGATAAT GTTATTCATT CGATTAAGAT TAAGTAAGGG TGTTGAACGC
TAA
 
Protein sequence
MKKTTWLGTM ASVLLLSSCS MLVSQQSGKQ SVSSSLMDFL YPNKDDRSAH SAEVPLLTLP 
VKVGIAFVPS TGFQKEAVHS KDQYELLEKV KAAFVQYDYI DRIEVIPSTY LAGGDGFNTL
EQVGRLYDVD VMALVSYDQV TQSVENNAAL LYWTIVGMYV IPGNENTVQT FVDTAVFDIK
SRKMLFRAPG ISKLEKRTTA IGIDETLAEK SMQGFDLAVT DMTKNLDDEL ARFKVRVKEE
KIAKVEHSNN YSGGTIDIRF GLLLLIMLFI RLRLSKGVER