Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2380 |
Symbol | |
ID | 4279291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2836885 |
End bp | 2837727 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638135176 |
Product | hypothetical protein |
Protein accession | YP_751063 |
Protein GI | 114563550 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CAACATGGTT AGGTACGATG GCATCAGTTT TATTATTGTC TTCATGCAGT ATGCTGGTGA GCCAGCAGTC GGGAAAACAG TCTGTCTCGA GCAGCCTGAT GGACTTTTTG TATCCTAATA AAGATGACCG TTCAGCACAT AGCGCCGAAG TTCCATTGCT CACATTACCG GTAAAAGTCG GTATTGCCTT TGTACCGTCT ACAGGCTTTC AAAAAGAGGC CGTGCATAGT AAGGACCAAT ATGAATTACT TGAAAAAGTG AAAGCGGCTT TTGTCCAATA TGATTATATT GATCGCATTG AAGTTATTCC GAGTACTTAT CTTGCTGGTG GTGATGGTTT TAACACATTA GAGCAAGTTG GGCGTTTATA TGATGTCGAC GTAATGGCCT TGGTGTCTTA CGATCAAGTG ACTCAGTCGG TAGAGAATAA TGCCGCGTTA TTGTATTGGA CAATCGTGGG GATGTATGTG ATTCCGGGCA ATGAAAATAC CGTACAAACA TTTGTCGATA CGGCAGTATT TGACATTAAA AGTAGGAAAA TGCTCTTTAG AGCGCCAGGG ATCAGTAAGC TTGAAAAACG CACTACTGCC ATAGGTATTG ATGAAACCTT AGCAGAAAAA TCGATGCAAG GTTTTGATCT AGCGGTCACT GATATGACTA AAAACTTAGA TGATGAGTTA GCTCGATTTA AGGTGAGAGT TAAAGAGGAG AAAATTGCCA AGGTGGAACA TAGTAATAAT TACAGCGGCG GGACAATTGA TATTCGGTTT GGTTTACTAT TATTGATAAT GTTATTCATT CGATTAAGAT TAAGTAAGGG TGTTGAACGC TAA
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Protein sequence | MKKTTWLGTM ASVLLLSSCS MLVSQQSGKQ SVSSSLMDFL YPNKDDRSAH SAEVPLLTLP VKVGIAFVPS TGFQKEAVHS KDQYELLEKV KAAFVQYDYI DRIEVIPSTY LAGGDGFNTL EQVGRLYDVD VMALVSYDQV TQSVENNAAL LYWTIVGMYV IPGNENTVQT FVDTAVFDIK SRKMLFRAPG ISKLEKRTTA IGIDETLAEK SMQGFDLAVT DMTKNLDDEL ARFKVRVKEE KIAKVEHSNN YSGGTIDIRF GLLLLIMLFI RLRLSKGVER
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