| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2361 |
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| Symbol | |
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| ID | 4279272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2811466 |
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| End bp | 2811945 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135157 |
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| Product | hypothetical protein |
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| Protein accession | YP_751044 |
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| Protein GI | 114563531 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGCGA ATACATATTT AGATTATGAA GGGATTAAAG GCGAAACCAC TGCTGAAGAA
TTCAAAGACC TGATTACTGT GTTATCAGTC GATTGGAATA TTAGCCGTGA GATCACTTCT
TTCACTGGTA CTGCAAAAGA CCGTGAAGCA AGCTCAACTC GTTTAGGTGA CGTGACCATT
ACTAAATTAC AAGATAATTC TTCTACTGAC TTGTTCAAAG AAGCGACTAT CGGTAAAGGT
AAAAAAGCGG TTTTCCACAT CACTAAGCAA GGTGACAAAA TCGAAGAAAT CATGCAAATC
GAATTAACTG ATGCAATGAT CTCTAGCTAC AGTGTTTCAG TTCATGGTGA CCGTCCTGTA
GAGACAATCA CTATCAGCTA CACTGAAATG ATGATGGCTG TTACGCCAAC TGATGATAAA
AACAACATTA CTGCAGCGCT ACGTTATGGC TACAGCGGTG TTAAAGGTCA ACAAATGTAA
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| Protein sequence | MQANTYLDYE GIKGETTAEE FKDLITVLSV DWNISREITS FTGTAKDREA SSTRLGDVTI
TKLQDNSSTD LFKEATIGKG KKAVFHITKQ GDKIEEIMQI ELTDAMISSY SVSVHGDRPV
ETITISYTEM MMAVTPTDDK NNITAALRYG YSGVKGQQM
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