| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2344 |
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| Symbol | sdhB |
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| ID | 4279256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2793092 |
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| End bp | 2793799 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135141 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_751028 |
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| Protein GI | 114563515 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0657231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAA CATTTGCATT GTATCGTTAT AATCCTGATG TAGATACCAA GCCTTATATG
AAGGATTACA CCTTAGAAGT GCCTGATGGC ACTGACATGA TGGTGTTAGA TGCGTTAATT
AAACTGAAAG AACAAGACTC AACGCTTGCG TTCCGTCGTT CATGCCGTGA AGGTGTGTGT
GGTTCTGACG GTGTTAACAT GAATGGTAAA AACGGATTAG CGTGTATTAC GCCATTATCT
ACCTTTAAAG GTAAGAAAAT TGAAATCCGT CCTTTACCAG GCATGCCAGT AGTTCGTGAT
TTGGTTGTAG ACTTAACTCA GTTCTACAAG CAATACGAAA AAATTAAGCC TTATCTGATT
AATGACGAAC AGGCTCCAGC TCGTGAACAT CTACAATCAC CTGAAGAGCG TGCTCATTTA
GATGGTTTAT ATGAATGTAT CATGTGTGCA TGTTGTTCAA CTGCTTGTCC ATCTTTCTGG
TGGAACCCTG ATAAATTTAT CGGGCCAAGT GGTTTATTAC ATGCATATCG TTTCTTAATT
GACAGTCGTG ATACGGCCAC TGAAGAGCGT TTATCTGAAC TAGATGATGC TTACAGTGTG
TTCCGTTGTC ATGGCATCAT GAACTGTGTT GACGTTTGTC CTAAAGGATT AAACCCAACT
AAAGCGATTG GTCACATTAA GTCAATGCTG CTTAAGCGAG CTGTTTAA
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| Protein sequence | MKLTFALYRY NPDVDTKPYM KDYTLEVPDG TDMMVLDALI KLKEQDSTLA FRRSCREGVC
GSDGVNMNGK NGLACITPLS TFKGKKIEIR PLPGMPVVRD LVVDLTQFYK QYEKIKPYLI
NDEQAPAREH LQSPEERAHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI
DSRDTATEER LSELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
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