| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2343 |
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| Symbol | sucA |
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| ID | 4279255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2790067 |
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| End bp | 2792889 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135140 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_751027 |
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| Protein GI | 114563514 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0982455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCAAG GCATCATGAA AGCCTGGCTC GAGTCGTCAC ATTTAAGTGG TTCGAACTCG
ACCTACGTAG AAGAGATGTA TGAAGCCTAT CAAGAAGATC CGCAATCAGT TACTCCTGAT
TGGCAGCTTG TTTTTGATAA CCTCCCTCCG GTTAACGGTG CCTCAGTAGA AGTACCCGAA
ACTGCTCACT CTAAAGTTCG TGACTATTTC CGTAGTTTAG CTTTACAAGG TCGTTTAAAA
AACGCTACTA GCGTCGGCGA CCCAGAGTTA GATGCGAAGC AAGTTAAAGT CCTGCAACTG
ATCAATGCTC ACCGTTTCCG TGGCCATCAA AATGCCAATT TAGATCCATT AGGATTGTGG
AAGCGTGAAG CTGTTCAGGA ATTGGATCCT GCTTACCACG GCTTAACCGT TGATGACATG
CAACGTCAGT TTAATACTGG TTCATTCGCC CTCGGCGGTG AGACCATGAA GCTTGCTGAT
ATTATTCATG CACTAAAGAG TACCTATTGT GGCTCGATAG GTGCTGAATA CATGCATATT
ACTGATACCG ATGAAAAGCG TTGGATCCAA CAACGTCTTG AACCGACATT AGGTAAAGCC
AAGTACGATA ACAGCGTCAA AAAGCGTATT CTTGAAGGGT TGAATGCAGC CGAAGGTATC
GAAAAATATC TTGGTGCTAA ATTCCCTGGA GCTAAACGAT TCTCTTTAGA AGGTGGTGAT
GCGCTCGTTC CGATGATGCG TGAAATCATT TACCGTGCAG GCGAAGCTGG AACTAAAGAA
ATCGTAGTAG GTATGGCTCA CCGTGGTCGT TTAAACTTGC TCATAAACGT GCTGGGTAAA
CGTCCTGCTG AATTGTTTGA TGAGTTTGCG GGTAAGCATG CGGACACTCA CGGTTCTGGC
GACGTAAAAT ATCACCAAGG TTTCTCATCT GATTTTGAAA CGCCAGGTGG AAACGTTCAT
TTAGCATTAG CCTTTAACCC ATCTCATTTA GAGATCGTTA ATCCAGTGGT TATTGGTTCT
GTACGTGCTC GTCAAGATCG TCGTGGTTGT AAAGACGGTC TGCAAGTTAT GCCTATCACC
ATTCATGGTG ATTCAGCTAT AACTGGCCAA GGCATTGTGC AAGAGACGTT CAACATGTCT
CAAACACGTG GTTTTACTAT TGGTGGTAGT ATTCGAATTG TGGTTAATAA CCAAGTTGGT
TTTACCACAT CAAACCAAGC TGACACACGT TCAACCGAAT ACTGTACTGA CATCGCTAAG
ATGGTTCAGG CACCTATTTT CCATGTCAAT TCTGACGATC CTGAAGCCGT TGCGTTTATT
TCTCAACTTG CAGTGGATTA TCGTAATGAA TTTAAACGTG ATGTAGTGAT TGATTTAGTG
TGTTATCGCC GTCATGGCCA TAACGAAGCT GATGAGCCTA GTGCGACTCA GCCGTTAATG
TACGCTAAAA TCAAAAAACA CCCTACGCCA CGTAAAATTT ATGCTGATAA GTTGATAGCT
GAAAACAGCA TTCCTGCCGA TGAAGTGACC GGACTGATTA ACCATTATCG TGATGCATTA
GATGCAGGTG ATTGTGTGGT TAAAGAATGG CGTCCTATGA CGTTACATAC AGTTGACTGG
ACACCTTATT TAAATCGCGA ATGGGATGAA GAATACGCCG GTTCAATGTC GATGGAACGT
CTGCAAAACT TAGCCAATAA GTTAGTTGAT ATTCCTGAAA ATCATACGCT TCAATCTCGT
GTTGCCAAAA TTTGTGCTGA TCGCACTGCC ATGGCTAAAG GCGAGAAGTT ATTAGACTGG
GGTTTCGCTG AAACGTTAGC TTATGCTTCT ATTCTTGAAG ATAAAAAGCG TGTGCGCATT
ACGGGTCAAG ACTCTGGTCG CGGCACGTTC TTCCATCGTC ATGCTGTATT GCATAGCCAA
AAAGACGGTT CTACCTATTT ACCTTTGCGT AATGTGGCTG ATGAACAAGG GCCAATTGAT
ATTATTGACT CAGTATTATC AGAAGCATCA GTGTTGGCAT TTGAATACGG TTACGCGACT
GCAGAACCTG GTGGCTTGAC CATTTGGGAA GCGCAGTTTG GTGACTTCGT TAACTGTGCA
CAGGTAGTGA TTGACCAATT CTTATCATCT GGTGAGCAAA AGTGGGGCCG TTTATGTGGT
CTGACTATGT TGTTACCTCA TGGTTATGAA GGTCAAGGAC CTGAGCATTC AAGTGGCCGT
TTAGAGCGTT TCTTGCAATT ATGTGCTAAC CACAACATGC AAGTGTGTGT GCCATCAACT
CCGGCGCAGG TTTATCATAT GTTGCGTCGC CAAGTTGTGC GTCCTATGCG TCGCCCGTTA
GTGGTAATGT CACCTAAATC TTTGCTACGT CACCCATTAG CGGTGTCTAC CTTAGAAGAA
CTTGCTGAAG GTACTTTCCA AAATATCATT GGTGAGATAG ATACCTTAGA TGCAAGTCAA
GTTGACCGTG TTGTATTCTG TAGCGGTAAG GTGTATTTCG AGTTACTTGA AAAGCGTCGT
AAAGAGAATG TGACCAACGT TGCCATCGTG CGTGTTGAGC AGCTGTATCC GTTCCCTGAT
GTGGAAATGC GTGCAGCGTT AGAAACATAT CAACATGTTA CTGATTTTGT TTGGTGTCAA
GAAGAGCCGC AAAACCAAGG GGCATGGTAC TGTAGTCAGC ATCATTTCTG GGCTAATATT
CCTGCAGGTG CTCAATTAAC TTATGCCGGT CGTGAAGCTT CTGCTGCACC AGCATGTGGT
TACCCTGGGT TGCATGTACA GCAGCAAGAA TCATTAGTAA ATAGCGCATT AAAACTGTCG
TAA
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| Protein sequence | MHQGIMKAWL ESSHLSGSNS TYVEEMYEAY QEDPQSVTPD WQLVFDNLPP VNGASVEVPE
TAHSKVRDYF RSLALQGRLK NATSVGDPEL DAKQVKVLQL INAHRFRGHQ NANLDPLGLW
KREAVQELDP AYHGLTVDDM QRQFNTGSFA LGGETMKLAD IIHALKSTYC GSIGAEYMHI
TDTDEKRWIQ QRLEPTLGKA KYDNSVKKRI LEGLNAAEGI EKYLGAKFPG AKRFSLEGGD
ALVPMMREII YRAGEAGTKE IVVGMAHRGR LNLLINVLGK RPAELFDEFA GKHADTHGSG
DVKYHQGFSS DFETPGGNVH LALAFNPSHL EIVNPVVIGS VRARQDRRGC KDGLQVMPIT
IHGDSAITGQ GIVQETFNMS QTRGFTIGGS IRIVVNNQVG FTTSNQADTR STEYCTDIAK
MVQAPIFHVN SDDPEAVAFI SQLAVDYRNE FKRDVVIDLV CYRRHGHNEA DEPSATQPLM
YAKIKKHPTP RKIYADKLIA ENSIPADEVT GLINHYRDAL DAGDCVVKEW RPMTLHTVDW
TPYLNREWDE EYAGSMSMER LQNLANKLVD IPENHTLQSR VAKICADRTA MAKGEKLLDW
GFAETLAYAS ILEDKKRVRI TGQDSGRGTF FHRHAVLHSQ KDGSTYLPLR NVADEQGPID
IIDSVLSEAS VLAFEYGYAT AEPGGLTIWE AQFGDFVNCA QVVIDQFLSS GEQKWGRLCG
LTMLLPHGYE GQGPEHSSGR LERFLQLCAN HNMQVCVPST PAQVYHMLRR QVVRPMRRPL
VVMSPKSLLR HPLAVSTLEE LAEGTFQNII GEIDTLDASQ VDRVVFCSGK VYFELLEKRR
KENVTNVAIV RVEQLYPFPD VEMRAALETY QHVTDFVWCQ EEPQNQGAWY CSQHHFWANI
PAGAQLTYAG REASAAPACG YPGLHVQQQE SLVNSALKLS
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