| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2341 |
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| Symbol | sucC |
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| ID | 4279253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2787600 |
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| End bp | 2788766 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135138 |
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| Product | succinyl-CoA synthetase subunit beta |
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| Protein accession | YP_751025 |
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| Protein GI | 114563512 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.188241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTGC ATGAGTATCA GGCAAAATCT TTATTTGCCG AATATGGTTT ACCAGTCTCT
GAAGGCTTTG CATGTGATAC TGCTCAAGAA GCAGTAGAAG CAGCTGGTCA CATTGGCGGA
AACTTATGGG TTGTTAAGTG TCAAGTACAC GCAGGCGGCC GTGGTAAAGC AGGTGGCGTT
AAAGTTACCG GTAATAAAGA CGAAATCAGA GCATTCGCTG AAAACTGGTT AGGTAAGAAC
TTAGTAACGT ACCAGACTGA CGCTAAAGGT CAGCCAGTTG CTAAAATTCT AGTTGAAAGC
TGTACTGACA TCGCTAACGA ATTGTACCTA GGTGCAGTAG TTGACCGTAG CACTCGTCGC
GTTGTGTTCA TGGCGTCGAC TGAAGGTGGT GTTGATATCG AAACTGTGGC TGAACATACG
CCAGAGCTTA TCCACACAGC TATCATTGAT CCGTTAACAG GTCCTCAAGC TTTCCAAGCT
CGTGATCTTG GCTTCAAGTT AGGTTTAAAC CCAACACAAA TGAAGCAGTT TACTAAGATC
TTTATGGGTC TAGCGAACAT GTTCAATGAC CATGATTTTG CGTTATTAGA AATCAATCCA
CTTGTTATCA CCACTGAAGG CAACCTTCAC TGTTTAGATG GCAAAATTGG TATTGATGGC
AATGCATTAT TCCGTCAGCC TAAAATCAAA GCAATGCACG ATCCATCACA AGATGATGCT
CGTGAAGCGC ATGCTGCTAA ATTTGAATTA AACTATGTTG CTTTAGACGG TAACGTAGGT
TGTATGGTTA ACGGTGCCGG CCTAGCAATG GGTACAATGG ACATCGTGAA CCTACACGGC
GGCAAGCCAG CTAACTTCTT AGACGTTGGC GGTGGAGCAA CTAAAGAACG TGTTGCAGAA
GCATTTAAGA TCATTCTTTC TGACAGCAAT GTTAAAGCGG TATTGGTTAA CATCTTCGGT
GGTATCGTGC GTTGCGATAT GATCGCTGAA GGTATTATTG GTGCGGTTAA AGAAGTTGGC
GTTAAAGTGC CAGTCGTTGT ACGTCTTGAA GGTACTAACG CTGAATTAGG TCGTGAAGTA
TTGGCTAAGT CTGGTCTTGA TATCATCGCG GCTACAAGTC TAACTGACGC GGCTGAGCAA
GTTGTTAAAG CTGCGGAGGG CAAATAA
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| Protein sequence | MNLHEYQAKS LFAEYGLPVS EGFACDTAQE AVEAAGHIGG NLWVVKCQVH AGGRGKAGGV
KVTGNKDEIR AFAENWLGKN LVTYQTDAKG QPVAKILVES CTDIANELYL GAVVDRSTRR
VVFMASTEGG VDIETVAEHT PELIHTAIID PLTGPQAFQA RDLGFKLGLN PTQMKQFTKI
FMGLANMFND HDFALLEINP LVITTEGNLH CLDGKIGIDG NALFRQPKIK AMHDPSQDDA
REAHAAKFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE
AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GTNAELGREV
LAKSGLDIIA ATSLTDAAEQ VVKAAEGK
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