Gene Sfri_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2338 
Symbolfur 
ID4279250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2785087 
End bp2785596 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content39% 
IMG OID638135135 
Productferric uptake regulator 
Protein accessionYP_751022 
Protein GI114563509 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.807618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTTAG ACTCAAGACA TATAATGATT AGAATATCCA CCGATGAACC GATTGGTTCT 
GCAATCAAGA GATTAGCAAT GACAGATGGA AATCAAGCAC TCAAAAAAGC CGGATTAAAA
ATAACCCTGC CGCGAGTTAA AATTCTAGAA CTGATGCAAT CCCCAGATAA CCAGCATATC
AGTGCAGAAG ACTTATATAA GAAGTTACTC GAAATAGGCG AGGAAATTGG CCTTGCTACT
GTATACAGAG TATTAAACCA GTTCGATGAT GCGGGCATTC TAAATCGTCA TCATTTTGAA
AGTGGTAAAG CGGTGTTTGA AATGTCGACT CAACAACACC ATGACCATTT AGTGTGTTTA
ACCTGTGATA AAGTGATTGA GTTTTCTGAC GACGTGATTG AACGTCGCCA AGATGAAATC
GCAATGCGTC ATAACATCAA GCTGACTCAC CATAGCTTGT ACCTTTATGG TCATTGTACC
AATGATACTT GTGATCACGC TGACGAATAG
 
Protein sequence
MFLDSRHIMI RISTDEPIGS AIKRLAMTDG NQALKKAGLK ITLPRVKILE LMQSPDNQHI 
SAEDLYKKLL EIGEEIGLAT VYRVLNQFDD AGILNRHHFE SGKAVFEMST QQHHDHLVCL
TCDKVIEFSD DVIERRQDEI AMRHNIKLTH HSLYLYGHCT NDTCDHADE