| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2334 |
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| Symbol | |
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| ID | 4279246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2778764 |
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| End bp | 2780947 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135131 |
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| Product | peptidyl-dipeptidase Dcp |
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| Protein accession | YP_751018 |
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| Protein GI | 114563505 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00135351 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGGCT TACCCCTTAA ACCCCTTTTC GCCAGCATCG CGGTAATATT TGCACTAAAT
GCCTGCTCCA TGTCAACCGT ATCCCAAACG ACCAATGACC CCACGCCATT AACAGCTGCA
CAAATAGAAC AACAACATGC TGATAATCCG TTTTTTAAAC CTTACGGTAC ATTTTTTGAA
ATCCCTGATT TTGCCAATAT TACAACCGAT GATTATATCC CAGCCTTTGA AGCTGGAATG
ACTGAGCTGC AAGAGCAAAT TAGTACTATC GCAAATAATC CTCAGCCCCC AACTTTTGAA
AATACGATTG AAGCAATGGA ATTTTCAGGC GATTTACTAA CCCGAGTATC ATACGTATTC
TTTAATTTGG CGGGCGCAGA CACTAACGAT GCGTTACAAG CTATATCCAA ACAGATTTCA
CCCAAACTAT CGTCATCACA AGATGATATT TTCCTAAATC CAATGCTGTT TCAACGAGTA
AAAACTTTAC ATGAACAACG TAATAGCTTG TCCTTGAATA CTGCACAGGC AAAATTACTG
GAAGATACAT ACAAATCATT CACCCGAGGC GGAGCAAATT TATCAGCAGA AGATAAAATT
ACCCTCCGAG GTTTAAATGA ACAAATTAGT AAGTTAAGCC TTACTTTTGG CGATAATTTA
TTAGCTGAAA CCAATGGCTT TCAACTCATC ATTGACAACC AAGAAGACCT TTCCGGTTTA
CCACAAGATG TGGTTGACAC TGCAGCTCGT AAAGCTACAA AACTGGGTCA TCCAGGTAAA
TGGATTTTTA CTCCTCATCG CCCATCAATG ACCCCATTTT TGACTTACGC TGATAATCGA
AAACTGCGTG AAACCCTATT TAAGGCTTAC GTTGCTCAAG CAAATAATGA CAATGAATTC
GATAATAAAA AGATTCTCGC CAAAATAGCC TCAATACGTT CACAACGAGC TCAGCTTATG
GGATATCAAT CTCATGCTCA TTTTGTACTT GAGTCTCGCA CTGCTAAGAC CCCAGAGAAT
GTCTATGCTC TATTAGATAA AGTGTGGCCA GCTGCATTAA AGCAGGCTAA AAGTGAAGTG
GCAGACATGC AAGCGCTAGT CGATACCCAA GGTACCGATT CGACCATTGA AGCATGGGAT
TGGTGGTATT ATTCAGATAA AATTCGCGTC GCTAAATACA GTTTCAATGA ACAGCAAACT
AAGCCCTATT TCTCACTTGA GAGTACCTTG AAAGGGGTAT TCTATACCGC TAATCGTTTA
TATGGCATTA CTGTCAAAGA ACGTACGGAT TTGCCCAAGT ATCACCCAGA TGTTCGTACC
TGGGAAGTCT ATGATAAAGA CGGTAGCTTG CTCGCTATAT TTATGGGCGA CTATTTTGTC
CGTCAAAGTA AGCGAGGCGG CGCGTGGATG AACGTATACC GTCAACAATA TAATATGAAT
GGAGTAGAAT CAAAGCCGAT TGTGGTTAAC GTACTTAACT TCCCTCGCCC AGCAGGTAAT
GAGCCAGCAC TACTTACATT TGACGAAGCC AGTACTCTGT TTCACGAATT TGGACATGCA
TTGCACGGCA TACTTTCTAA TGTGACTTAC CGTTCTCAAT CCGGAACTAG CGTACCAAGT
GATTACGTTG AGTTTCCATC TCAAGTGATG GAAAACTGGA TGACACAGCC GGAAGTATTA
TCACAATTTG CAAAGCATTA TCAAACGGGT GAAATTATTC CCCAATCTTT AATAAATAAA
ATCCAAGCCG CTAGCCAATT TAATCAAGGT TTTGCCACTG TCGAATATAT GGCTGCCACT
TATTTAGACT TGGATTGGCA TTCTCTTAAA GATAGCAAAC TACGCGATGC AAAAGATTTT
GAATTGGCCT CATTAAATAA AATGGGCTTA ATTAGCCAAA TAGCCCCTCG TTATCGCAGC
ACTTACTTTT CGCATATTTT TGCAGGCGGT TATTCTGCAG GATACTACAG TTACCTTTGG
TCTGATATTT TAGGTGCTGA TGCTTTCGAA GCATTTAAAG AAAATGGAAT TTTTGATCCA
AAAACAGCTC AAAAATTCCG TGATAGTATT TTATCCAAAG GCGGCAGTGC AGATCCGATG
GAATTATACA AACAATTTAG AGGTAAGGAT GCAGGTATTG AACCGCTATT ACGTAGCAGA
GGTTTATTAA AAGAAAAACT TTAA
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| Protein sequence | MKGLPLKPLF ASIAVIFALN ACSMSTVSQT TNDPTPLTAA QIEQQHADNP FFKPYGTFFE
IPDFANITTD DYIPAFEAGM TELQEQISTI ANNPQPPTFE NTIEAMEFSG DLLTRVSYVF
FNLAGADTND ALQAISKQIS PKLSSSQDDI FLNPMLFQRV KTLHEQRNSL SLNTAQAKLL
EDTYKSFTRG GANLSAEDKI TLRGLNEQIS KLSLTFGDNL LAETNGFQLI IDNQEDLSGL
PQDVVDTAAR KATKLGHPGK WIFTPHRPSM TPFLTYADNR KLRETLFKAY VAQANNDNEF
DNKKILAKIA SIRSQRAQLM GYQSHAHFVL ESRTAKTPEN VYALLDKVWP AALKQAKSEV
ADMQALVDTQ GTDSTIEAWD WWYYSDKIRV AKYSFNEQQT KPYFSLESTL KGVFYTANRL
YGITVKERTD LPKYHPDVRT WEVYDKDGSL LAIFMGDYFV RQSKRGGAWM NVYRQQYNMN
GVESKPIVVN VLNFPRPAGN EPALLTFDEA STLFHEFGHA LHGILSNVTY RSQSGTSVPS
DYVEFPSQVM ENWMTQPEVL SQFAKHYQTG EIIPQSLINK IQAASQFNQG FATVEYMAAT
YLDLDWHSLK DSKLRDAKDF ELASLNKMGL ISQIAPRYRS TYFSHIFAGG YSAGYYSYLW
SDILGADAFE AFKENGIFDP KTAQKFRDSI LSKGGSADPM ELYKQFRGKD AGIEPLLRSR
GLLKEKL
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