| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2326 |
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| Symbol | |
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| ID | 4279238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2768667 |
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| End bp | 2769827 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135123 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_751010 |
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| Protein GI | 114563497 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATTCT ATGTTAAGCA AGGTCAGATC CCGACCAAAC GCCACATTGC CTTCGAAAAA
GACAATGGCG AGTTGTACCG TGAAGAATTA TTTTCAACTC ATGGCTTTTC TAATATTTAT
TCAAATAAAT ATCATCACAA TATGCCAACC AAAGCGATAG ACGTTCAACC TTACACGTTA
TCTCATGGTG AACAATGGCA AGACTCATTA ATTCAAAATT ACAAATTAGA CTCGCGCCAA
GCCGACTGCC AAGGCAACTT TTTTAGCGCC CGAAATAAAA TTTTTTTCAA TAATGATGTC
GCCATGTACA CCGCTAAGGT GACTGAAGAT ACCAATGAGT TTTATCGTAA TGCCTATGCT
GACGAAGTGG TGTTTATTCA CGAAGGTGAA GGCCAACTGT TGAGTGAATA CGGCGTCATT
GATACCAAAA AATGGGATTA CTTAATTATT CCACGCGGGA CCACGTACCA ACTTAAATTT
AACGATTATG AAAATGTGCG TTTATTTGTG ATCGAATCAT CTTCAATGGT CGAAGTGCCA
AAGCATTTCA GAAACGAATA CGGCCAAATG CTTGAATCTG CACCTTACTG TGAACGAGAC
ATTCGTACGC CAACCTTGGC TGATGCCGTG GTTGAAAAAG GTGCGTTTCC GTTAATGTGT
AAATTTGGTG AGCGTTATCA AAAAATGACT CTGCAATGGC ATCCATTTGA CCTAGTTGGC
TGGGATGGCT GCGTTTATCC TTGGGCATTT AACATCAGTG AATATGCACC CAAAGTAGGC
AAAATTCATT TACCACCGTC TGAGCATTTA GTGTTTACTG CACACAATTT TGTCATTTGT
AACTTTGTGC CACGCCCATA CGATTTTCAT CCTAAATCGA TACCAGCACC TTATTACCAC
AACAACATCG ACAGCGATGA AGTTTTGTAT TACGTCGATG GTGACTTTAT GAGCCGTACA
GGTATTGAAG CGGGCTATAT GACGTTACAC CAAAAAGGTG TGCCGCATGG GCCTCAACCT
GGTCGCACAG AAGCCTCTAT CGGCAAAACC GAAACATACG AATATGCGGT GATGGTTGAT
ACCTTCGCCC CACTGAATTT AACCGCTCAT GTCAAAAATT GCATGAGTGA TGATTACAAC
CGCTCTTGGT TAGAAAACTA A
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| Protein sequence | MPFYVKQGQI PTKRHIAFEK DNGELYREEL FSTHGFSNIY SNKYHHNMPT KAIDVQPYTL
SHGEQWQDSL IQNYKLDSRQ ADCQGNFFSA RNKIFFNNDV AMYTAKVTED TNEFYRNAYA
DEVVFIHEGE GQLLSEYGVI DTKKWDYLII PRGTTYQLKF NDYENVRLFV IESSSMVEVP
KHFRNEYGQM LESAPYCERD IRTPTLADAV VEKGAFPLMC KFGERYQKMT LQWHPFDLVG
WDGCVYPWAF NISEYAPKVG KIHLPPSEHL VFTAHNFVIC NFVPRPYDFH PKSIPAPYYH
NNIDSDEVLY YVDGDFMSRT GIEAGYMTLH QKGVPHGPQP GRTEASIGKT ETYEYAVMVD
TFAPLNLTAH VKNCMSDDYN RSWLEN
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