| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2325 |
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| Symbol | |
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| ID | 4279237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2767518 |
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| End bp | 2768447 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135122 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_751009 |
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| Protein GI | 114563496 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.695132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAATAG ATATCGATGC CTTTAATGTA CTGCAAGTAC TTGTTGAAGA AGGAAGTTTT
GCAAAAGCTT CCGAGCGATT ACACAAGGCA CAATCGGCAG TAAGCTATCA GGTTAAAAAG
CTAGAGCAAC ATCTCGGCGT GACATTATTT AATCGAGATC ATTATCGAGC GGAATTAACA
CCAGAAGGTA AGGTGATTTT GGCCGAAGGG CAACGGCTGT TACAGCATTT AGCCAATATT
GAACATCTTG CCAGTCGCTT TAGTCAGGGG TGGGAACCTA AGCTTGAGTT AGTCATCGAC
GGTGCTTTAC CGATGGAGCC GATCATGACC GCGCTTAAGC GTATGTCAGA ACACAATATA
CCGACTAAAG TACAACTTAA TATGGAGTTT TTAGGCGGAG TACAGCATCG CTTTGAGCGC
GACCAAGCAG ACTTAATGCT GGTTAAGGAT TATCGTACTG GTCCCTCGTA TCACCCTAAA
CCGTTACCTA CGATTACCAG TGTGCTAGTG GCGTCATCAC AACATCCATT AAGTCTACTT
AAGGAAATTA GTTTACCTGA GTTACAACAA CATGTTGAGT TAACCATTGA AGATTCATCT
CCAGGTAAAC GCGACCGCGA TGAAATGCAA TTTGGCGGCG ATAAAGTATT TTATTTATCA
GGTTTTATCA TGAAAAAAAA TGCCTTACTA AAAGGCCTCG GTTTTGGTTG GATGCCAGAC
TTTTTAATTG CCGAAGAATT ACATCAAAGA CAACTTATTG AAGTTGATTT TATTGGTGGT
AATCGGTTTA GCTTTACACC GCAATTAGTG TCCACACTTG AACGTCCGCT GGGGCGAGCA
GGGCAACTAT TTACTGAGCT TATTTTAGAA GAGTTTGCTC AATATCAATT ACAGCATCAA
TCAGGATTAA GCGGTGCAGG TTTAGGTTAA
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| Protein sequence | MRIDIDAFNV LQVLVEEGSF AKASERLHKA QSAVSYQVKK LEQHLGVTLF NRDHYRAELT
PEGKVILAEG QRLLQHLANI EHLASRFSQG WEPKLELVID GALPMEPIMT ALKRMSEHNI
PTKVQLNMEF LGGVQHRFER DQADLMLVKD YRTGPSYHPK PLPTITSVLV ASSQHPLSLL
KEISLPELQQ HVELTIEDSS PGKRDRDEMQ FGGDKVFYLS GFIMKKNALL KGLGFGWMPD
FLIAEELHQR QLIEVDFIGG NRFSFTPQLV STLERPLGRA GQLFTELILE EFAQYQLQHQ
SGLSGAGLG
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