Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2324 |
Symbol | |
ID | 4279236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 2766553 |
End bp | 2767341 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638135121 |
Product | hypothetical protein |
Protein accession | YP_751008 |
Protein GI | 114563495 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.42555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCATGA AAAGTCATGA AGTTGATTAT GAAATTATAG GTTCTAGCAT GCAGCTGGTT GAAGTTGAAT TAGACCCAAA TGAGTCTGTG ATTGCTGAAG CGGGGGCGAT GACTTACCTC GAAGAAGACA TTATGTTCGA GGCCAGAATG GGTGATGGCT CTGAACCGGA ATCCGGTTTT TTTGGCAAGT TACTTGGTGC TGGTAAACGC GCCATTTCGG GTGAGGGTAT TTTTATGACT CACTTTACCA ATCAAGGCCA ACAGAAACGA AAAGTAGCAT TTGCTGCACC ATTTCCTGGC ACTATTCTGG CAATTGACTT AGCTCAACAT CAAGGTGAAC TTATCTGCCA AAAAGACAGC TTTTTAACGG CAGCTTTAGG TACGCAAGTG AGTATGAAGT TTAATAAACG TTTAGGGACC GGTTTTTTTG GTGGGGAAGG ATTTATTCTA CAAAGCCTAA AAGGCGATGG CATGGCGTTT GTGCATGCTG GTGGGACATT GATTAAAAAA GAATTACACG GTGAGACATT GCGGGTCGAT ACCGGTTGTT TAGTGGGGTT CACTCCTGGA ATTGATTATG ACATACAACG TGCAGGCTCA TTAAAGTCGA TGGTATTTGG TGGTGAAGGT TTGTTCCTTG CAACCTTAAA AGGCCATGGA ACTGTGTGGT TACAAAGCTT ACCGTTTTCT CGTATGGCTG ACAGAATCAT TGCTCATGCA CCATCAAGTG GTGGCAAAGA CCAAGGTGAA GGTTCTGTAC TTGGCGGAAT AGGTCGAATG ATTAACTAA
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Protein sequence | MSMKSHEVDY EIIGSSMQLV EVELDPNESV IAEAGAMTYL EEDIMFEARM GDGSEPESGF FGKLLGAGKR AISGEGIFMT HFTNQGQQKR KVAFAAPFPG TILAIDLAQH QGELICQKDS FLTAALGTQV SMKFNKRLGT GFFGGEGFIL QSLKGDGMAF VHAGGTLIKK ELHGETLRVD TGCLVGFTPG IDYDIQRAGS LKSMVFGGEG LFLATLKGHG TVWLQSLPFS RMADRIIAHA PSSGGKDQGE GSVLGGIGRM IN
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