Gene Sfri_2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2324 
Symbol 
ID4279236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2766553 
End bp2767341 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content43% 
IMG OID638135121 
Producthypothetical protein 
Protein accessionYP_751008 
Protein GI114563495 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.42555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGA AAAGTCATGA AGTTGATTAT GAAATTATAG GTTCTAGCAT GCAGCTGGTT 
GAAGTTGAAT TAGACCCAAA TGAGTCTGTG ATTGCTGAAG CGGGGGCGAT GACTTACCTC
GAAGAAGACA TTATGTTCGA GGCCAGAATG GGTGATGGCT CTGAACCGGA ATCCGGTTTT
TTTGGCAAGT TACTTGGTGC TGGTAAACGC GCCATTTCGG GTGAGGGTAT TTTTATGACT
CACTTTACCA ATCAAGGCCA ACAGAAACGA AAAGTAGCAT TTGCTGCACC ATTTCCTGGC
ACTATTCTGG CAATTGACTT AGCTCAACAT CAAGGTGAAC TTATCTGCCA AAAAGACAGC
TTTTTAACGG CAGCTTTAGG TACGCAAGTG AGTATGAAGT TTAATAAACG TTTAGGGACC
GGTTTTTTTG GTGGGGAAGG ATTTATTCTA CAAAGCCTAA AAGGCGATGG CATGGCGTTT
GTGCATGCTG GTGGGACATT GATTAAAAAA GAATTACACG GTGAGACATT GCGGGTCGAT
ACCGGTTGTT TAGTGGGGTT CACTCCTGGA ATTGATTATG ACATACAACG TGCAGGCTCA
TTAAAGTCGA TGGTATTTGG TGGTGAAGGT TTGTTCCTTG CAACCTTAAA AGGCCATGGA
ACTGTGTGGT TACAAAGCTT ACCGTTTTCT CGTATGGCTG ACAGAATCAT TGCTCATGCA
CCATCAAGTG GTGGCAAAGA CCAAGGTGAA GGTTCTGTAC TTGGCGGAAT AGGTCGAATG
ATTAACTAA
 
Protein sequence
MSMKSHEVDY EIIGSSMQLV EVELDPNESV IAEAGAMTYL EEDIMFEARM GDGSEPESGF 
FGKLLGAGKR AISGEGIFMT HFTNQGQQKR KVAFAAPFPG TILAIDLAQH QGELICQKDS
FLTAALGTQV SMKFNKRLGT GFFGGEGFIL QSLKGDGMAF VHAGGTLIKK ELHGETLRVD
TGCLVGFTPG IDYDIQRAGS LKSMVFGGEG LFLATLKGHG TVWLQSLPFS RMADRIIAHA
PSSGGKDQGE GSVLGGIGRM IN