| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2318 |
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| Symbol | |
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| ID | 4279230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2761726 |
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| End bp | 2762388 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135115 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_751002 |
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| Protein GI | 114563489 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAATG TTCAATCACA AAGCACACAA AGTCGTTATG ATAAGGGGCA TCTTGCAAAA
AGATCCCTAA TTAAACTAAG CGGTGCTATG AAATCAAACG AACCCAATCC AATGGCTGAT
GAGCTGGCGT CATTAATGAC GCAGGTGGCT AATGATCGAT GCAAAACATC TTTTGCAAAA
CTTTTTTCGC ATTTTGGCCC AAAAATTAAC TCTTTTGGTG TCCAGCGCTT AAGCCAACAG
GGCTTAGCCA TGGATTTAGT GCAAGAGACA ATGACTAGAG TATGGACAAA AGCCCATCTA
TATAACGCAG AGAAAGCAGC GGTAAGCACT TGGGTATTTA CCATCATGCG TAATCAATGT
TTTGACATGC TTCGTAAAGT ACAACACAAC CGTGAAGATT CTTTCGGTGA TGATATTTGG
CCTTTATTTG AGTCTGACGA AGCTGAAAGC AACGACAATG ATTTTTTATT ATCGGCCAGT
TTATTGCAGC ATGTAGAAGA ATTACCCCCT CTTCAGCGCC AGGTAGTACA AGGTATTTAT
ATGCAAGAGC TTACTCAACA AGAGTTAGCG GAAAAACTTA ATATTCCAAT TGGAACGGTT
AAATCACGAC TTAGACTCGG GTTAGAAAAA TTAAAAAGCT TTATGGAGAA ACACTATGAT
TAA
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| Protein sequence | MENVQSQSTQ SRYDKGHLAK RSLIKLSGAM KSNEPNPMAD ELASLMTQVA NDRCKTSFAK
LFSHFGPKIN SFGVQRLSQQ GLAMDLVQET MTRVWTKAHL YNAEKAAVST WVFTIMRNQC
FDMLRKVQHN REDSFGDDIW PLFESDEAES NDNDFLLSAS LLQHVEELPP LQRQVVQGIY
MQELTQQELA EKLNIPIGTV KSRLRLGLEK LKSFMEKHYD
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