| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2316 |
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| Symbol | |
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| ID | 4279228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2759541 |
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| End bp | 2760482 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638135113 |
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| Product | response regulator receiver modulated CheW protein |
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| Protein accession | YP_751000 |
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| Protein GI | 114563487 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.90141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAG TGCTAGATAC GGTAGATCAA AGAACTAAGT TAGTTGGCGA AAACCGTTTA
GAATTGTTGT TATTTCGCAT TAACTCAACA CAGTTGTTTG CCATTAATGT ATTTAAAATC
AAAGAAGTGG TTAAGTTACC ACCCTTAAAT AATTTACCCG GCAGTAATCA TAATGTTTAT
GGCGTCGCTA ACTTTAGAGG CATGTCTATC CCGGTGATTA ATTTACGAGA AGCGATTGGT
TTCTCACCGA TGCCCGTAAA TGACGATTGT AACTTGATTA TTACCGAGTA TAACCGCAGT
GTGCAGGCCT TTTTAGTCGG TAAAGTCGAG AATATCGTTA ACATGAGCTG GAGTGATATT
ATGCCGCCGC CCAAAACCAC TGGCGGACAT AATTACTTAA CAGCAATAAC AAAAATAGAA
GACCAAGGAC ACTTACGATT AGTGTCTATT ATTGATGTTG AGAAGGTATT AGCTGAGATT
ATTGATTACG ACGTGAAGTT ATCTGACGGT GTGTTAGATG AAGCGCTCGT TTCTTATATG
CCTGGTCGTA AGATATTAAT TGTGGATGAT TCGTCAACGG CGCGCAAACA AGTAAGAGAC
ACTCTCAATC AACTTGGTAT AGAGATTATT GAAGCTTCAG ATGGATTACA AGCTTTGCAA
TTATTACAAT CGTGGGCTGA TGAAGGCAGA CAGGTTGCCG ATGAATTGCT AATGATGATT
ACCGATGCCG AAATGCCCGA AATGGATGGT TATAAGTTGA CCTTTGAGGT ACGAAATGAT
CCTCGAATGG CGGCACTATT TATTACTCTT AATACTTCTT TGAGTGGCAG TTTTAACCAA
GCGATGGTAG AAAAAGTGGG CTGTAATAAG TTTATCTCTA AATTCCAGCC CGACTTATTA
GTTAGCGTTG TTCAAGATCG TTTACGGAGT ATTCTTGGTT AG
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| Protein sequence | MRKVLDTVDQ RTKLVGENRL ELLLFRINST QLFAINVFKI KEVVKLPPLN NLPGSNHNVY
GVANFRGMSI PVINLREAIG FSPMPVNDDC NLIITEYNRS VQAFLVGKVE NIVNMSWSDI
MPPPKTTGGH NYLTAITKIE DQGHLRLVSI IDVEKVLAEI IDYDVKLSDG VLDEALVSYM
PGRKILIVDD SSTARKQVRD TLNQLGIEII EASDGLQALQ LLQSWADEGR QVADELLMMI
TDAEMPEMDG YKLTFEVRND PRMAALFITL NTSLSGSFNQ AMVEKVGCNK FISKFQPDLL
VSVVQDRLRS ILG
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