| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2309 |
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| Symbol | ushA |
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| ID | 4279221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2752962 |
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| End bp | 2754680 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638135106 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_750993 |
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| Protein GI | 114563480 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.897886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATA TGTTAATTAA AGGATTAGTC GCAACGGCTG TACTAGCAGC ATTAACCGGT
TGTGGCAGTG ACGACGACAA TACTGCAGTC GTAGCACCGA CAACATGTGC CGAAGCAGGT
GCAGATTGTA AAATATTTAC AGTATTACAC ACCAACGACA ACCATGGCCG TTTCTGGTCT
AACAGTGATG GCGAATATGG TATGGCAGCG CGTAAGACGT TGATCGACCA AATTCGTGCA
GAAGTCAGTG CAAACGGTGG CGAATCGCTA TTACTGTCTG GCGGTGATAT CAACACTGGT
GTTCCAGAAT CAGATTTACA AGATGCATTA CCAGATTTTA TCGGTATGAA CGAAATCGCT
TATGATGCAA TGGCCGTCGG TAATCACGAA TTTGATAACC CATTAGCAGT ACTAGATTCT
CAACGTTCAG TTGCAAACTT CCCAATGCTT GCTGCAAACA TTTATAAAGC AGACGGTACT
CGTTATTTTG ATGCTTATAA AGTGTTTGAC GTTAACGGTG TTCGTGTTGC TGTTATCGGT
TTAACCACCG AAGACACGGC TAAAATCGGT AACCCAGAAT TTATTAAAGA TTTAACGTTT
ACAGACCCAA CAACTGAAGC GGCTAAAGTT ATTGCAGAAA TTAAAGCTGC AGATACCGCT
GATTTAATTT TTGCGACGAC TCATATGGGT CACTATGCTG ATGCGCAAAA TGGTAGTAAT
GCTCCTGGCG ATGTGACATT AGCTCGTGCA CTTGCTGCAG GTGATTTAAG TGCCATTATT
GGTGGCCACT CTCAAAACCC TGTATGTATG GAACCAGATA CTAACGACTA TGCCGAGTTT
GCTCCTGGTG ACGCTTGTAC TCCTGACATG CAAAATGGCA CTTACATTAT GCAAGCTCAT
GAATGGGGTA AGTATGTTGG CCGTGCTGAT TTTGAATATT TCAACGGTGA GCTTCACCTT
GCAAGCTACA AGTTAATTCC GGTTAATTTG AAGAAAACGG TTGAAGATGC TGAAGGTAAC
AAAACTAAAG TTTTAGTTGC TGATGAAATC ACAGCTGATG CAGATTTAAA AGCACTACTT
TCTTATTACC AAGAACGTGG TCAAGGCCAA CTTGATGAAA TTATTGCTAC TACAGATGCA
TTATTAGACG GTGAGCGTGC AAATGTACGT AACATGCAAA CTAATTTAGG TCGTTTAGTT
GCTGAAGCAC AGCGTACTAA AGTGGGTGCA GATATCGGCG TGATGAACTC TGGTGGCGTA
CGTGCTTCTA TTCAAGCTGG TGATATTTCT TATCGTGACG TGTTAACTGT GCAGCCTTTT
GGCAACATGG TAACGTTGAG CACTATGACT GGTGCAGAAG TGACTGAGTA TCTTAATACT
GTAGCTTCAT TCCAACGTGG TGCAGGTGCA TATGCACAAA TCACTGGCGT GAAAATGACG
GTTGATTGTA CTGCTCAAAC TGTTGCTATT AGTGAAATTA ATGGTAAAGA CTACAGTGCA
ACTGATTCAT ATAGCTTCAC TGTACCAAGC TTTAATGCTG CTGGCGGTGA TGGTTACCCA
GTATTAGACC CAATCCAAAC AGGTTATGTT GATGCAGAAG TGTTATACAC TTTCTTCAAA
GACAAAGGCA CTATTGCTGC CGCTGACTAC GCGCCAATAG GTGACATTGT TTATGAAAAC
TCAAACAGCC CATTAGGTTG TGAAGTTACT GCAAACTAA
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| Protein sequence | MTNMLIKGLV ATAVLAALTG CGSDDDNTAV VAPTTCAEAG ADCKIFTVLH TNDNHGRFWS
NSDGEYGMAA RKTLIDQIRA EVSANGGESL LLSGGDINTG VPESDLQDAL PDFIGMNEIA
YDAMAVGNHE FDNPLAVLDS QRSVANFPML AANIYKADGT RYFDAYKVFD VNGVRVAVIG
LTTEDTAKIG NPEFIKDLTF TDPTTEAAKV IAEIKAADTA DLIFATTHMG HYADAQNGSN
APGDVTLARA LAAGDLSAII GGHSQNPVCM EPDTNDYAEF APGDACTPDM QNGTYIMQAH
EWGKYVGRAD FEYFNGELHL ASYKLIPVNL KKTVEDAEGN KTKVLVADEI TADADLKALL
SYYQERGQGQ LDEIIATTDA LLDGERANVR NMQTNLGRLV AEAQRTKVGA DIGVMNSGGV
RASIQAGDIS YRDVLTVQPF GNMVTLSTMT GAEVTEYLNT VASFQRGAGA YAQITGVKMT
VDCTAQTVAI SEINGKDYSA TDSYSFTVPS FNAAGGDGYP VLDPIQTGYV DAEVLYTFFK
DKGTIAAADY APIGDIVYEN SNSPLGCEVT AN
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