| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2307 |
|---|
| Symbol | |
|---|
| ID | 4279219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 2751550 |
|---|
| End bp | 2752395 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638135104 |
|---|
| Product | aldose 1-epimerase |
|---|
| Protein accession | YP_750991 |
|---|
| Protein GI | 114563478 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTCGG TTACCACTAA AAGACATCCC AATGGTCTTG ATTATGTTGC TGTTGACACA
GCACTTTGCC AAGCACGTAT TTTTATGCAA GGTGCACAAA TAGATCAATT TATACCTGTC
GGCAAAGCAC CACTATTGTG GGTATCAAGT GCAGATGATT ATCAACCTGG TAATGGTATC
AGAGGTGGAA TCCCCATTTG CTGGCCTTGG TTTGGCATGA GCGACACTCC AGGGTTTCCG
CAGCATGGCT TTGCACGAAA CAAAACCTGG TCGCTTGAAT CTGTCAAAAT GCGTAACCAA
TTAGTAGACT TAGTTTTCAC CTTGCCCGCC AGTGAAATGG ATAAACAATA TTGGCCTCAT
AATACCCAAG TAAAGGTGTT ATTCACCTTA GGCGAAACCT TATCGGTCAG CCTAGTGAAT
ACTAATAATG GAAATGATAA CGTAATACTG ACCCAAGCAT TGCATAGCTA CTTTCCTATT
GAAGATATTC ATCAATTGAA AGTGAGTGGC TTTACTGGGT CGCAATACAT TGAGTTTGGT
GAAGGGCCGT TTAAACAAGT CGATGATGTC GTCAAGTTTG AACGAGAAAC CGACCGGGTT
TACACCCAAT TAGGTGATAC TCAGGAGCTA CATACACAAA ATGGTACCAT TGTAGTCAGT
CGCGAAAACA GCCAATCCGC TGTACTTTGG AACCCTTGGA TAGACAAGTC GATGCGCCTT
TCACGCTTTA ATGCCGATGA TTACCTAACC ATGGTGTGCT TAGAAGCCGC TAATGTTCTG
GACGACAGTG TGACTTTAGC GCCAGGGCAA AGCCATACGT TAACCACTCA TATTAGCTGG
AAATAA
|
|---|
| Protein sequence | MGSVTTKRHP NGLDYVAVDT ALCQARIFMQ GAQIDQFIPV GKAPLLWVSS ADDYQPGNGI
RGGIPICWPW FGMSDTPGFP QHGFARNKTW SLESVKMRNQ LVDLVFTLPA SEMDKQYWPH
NTQVKVLFTL GETLSVSLVN TNNGNDNVIL TQALHSYFPI EDIHQLKVSG FTGSQYIEFG
EGPFKQVDDV VKFERETDRV YTQLGDTQEL HTQNGTIVVS RENSQSAVLW NPWIDKSMRL
SRFNADDYLT MVCLEAANVL DDSVTLAPGQ SHTLTTHISW K
|
|---|
| |