Gene Sfri_2301 details

Gene Information

• Locus tag: Sfri_2301
• ID: 4279213
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 2747574
• End bp: 2748290
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638135098
• Product: hypothetical protein
• Protein accession: YP_750985
• Protein GI: 114563472
• COG category: [S] Function unknown
• COG ID: [COG2859] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAGTT CGTCTCGTAG TGCTGCTATT TTCGGAATAT TAATTGCACT GGGCTTAGGC 
GCTTTAGGCG TATTACTCAA ACAAGCCATT GTTGAGTACA AGTTACTCGA CCGCAGCGTC 
ACGGTAAAAG GTCTGGCAGA AAATGAATAT TCTGCCGACA TCGTCATTTG GCCTATCCAA 
TTTACAGCTG CCAATAATAA TCTCGATGAA CTATACAAAC AGCTCGAAGC ACAAAATAAC 
CAAGTGGTTA ACTTTTTAGC CGAACAAAAT ATCGATCCTA AAGAGATCAC TCTCGCCGCC 
CCCACTATTA CTGATAAATT GGCGCAACAG TATGGTGGAA ATCAACCAGT AGAATTGCGC 
TATACGGCGT CGCAAACCAT TACGGTATAT TCTAATGACA TAGATAAAGT TCGCGGTGCT 
ATGCCTAAAT TAACTGAGCT AGGTAAAATG GGAATTGTTT TCTCGCAAAA TAACTATGAT 
GCCCAAGTCG AATATATTTT CAGCCGATTA AATGACGTTA AACCGAAAAT GATCGAAGAG 
TCGACCACCA ATGCACGTTC AGTTGCTGAA AAATTTGCTA CCGATTCACA AAGCCGATTA 
GGTAAAATAA AAAAAGCAAC TCAAGGACAA TTCAGCATTA ACAATAGAGA TAAAAACACG 
CCATATATTA AACAGGTACG GGTCGTATCT ACCATCGAAT ATTATTTAGC GGATTAA 

 

Protein sequence

MQSSSRSAAI FGILIALGLG ALGVLLKQAI VEYKLLDRSV TVKGLAENEY SADIVIWPIQ 
FTAANNNLDE LYKQLEAQNN QVVNFLAEQN IDPKEITLAA PTITDKLAQQ YGGNQPVELR 
YTASQTITVY SNDIDKVRGA MPKLTELGKM GIVFSQNNYD AQVEYIFSRL NDVKPKMIEE 
STTNARSVAE KFATDSQSRL GKIKKATQGQ FSINNRDKNT PYIKQVRVVS TIEYYLAD