| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2298 |
|---|
| Symbol | |
|---|
| ID | 4279210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 2743730 |
|---|
| End bp | 2744542 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638135095 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_750982 |
|---|
| Protein GI | 114563469 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1806] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000577143 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCAA AAGTATTCTA TATTTCAGAT GGGACCGCGA TCACAGCGGA GGTTTTTGGA
CATGCGGTAC TTTCGCAATT TCCTATAGAA TTTGAAGCAC TTACGATTCC GTTTGTCGAA
ACCATTCAAA AAGCTCAAAA AGTTAAGCAA CAAATAAATG ATTGTTTTAT TACAACAGGT
GAAAGACCAC TTGTGTTCCA CTCGATCATT AATCCTGAGA TCCGCAATGT GATTTTTTCG
AGTGAATGTG TTGATTATGA CTTTTTGAAC ACCTTTGTTG CGCCACTAGA ACAACACTTA
GGTGTACAAG CTAAGCCTTT ATTGCACCGA ACCCATGGTA AAAGTAACCA TGGTTATGAA
ACCCGTATCG ATGCGATTAA CTACACCATG GAGAATGATG ACGGCCAAAC CATGAAACAC
ATGGATAAAG CCGACATTAT TTTATTAGGC GTGTCTCGTT GCGGTAAAAC ACCATCAAGT
TTATATCTGT CAATGCAGTT TGGTATAAAG GCCGCAAACT ACCCGTTTAC TGAAGAAGAC
ATGGATAACC TCAAGTTACC TGAAGCATTG AAACGCAATA AATCAAAGCT CTTTGGCTTA
ACCATCGATC CACATCGTTT GCATGAGATA CGTCAAAGCC GCATGGAAAA TAGCCGCTAC
TCTTCATTAA GACAGTGCCG ACTTGAGGTA AAAGAAGTCG AAATGCTGTA CAAAAAAGAA
CGTATACCCT TTGTAAATAC CACTAACCAT TCGGTTGAAG AAATTGCCAC TAAAATTCTT
GATATCACCG GTCTAGAGCG TCATATGTTC TAA
|
|---|
| Protein sequence | MTPKVFYISD GTAITAEVFG HAVLSQFPIE FEALTIPFVE TIQKAQKVKQ QINDCFITTG
ERPLVFHSII NPEIRNVIFS SECVDYDFLN TFVAPLEQHL GVQAKPLLHR THGKSNHGYE
TRIDAINYTM ENDDGQTMKH MDKADIILLG VSRCGKTPSS LYLSMQFGIK AANYPFTEED
MDNLKLPEAL KRNKSKLFGL TIDPHRLHEI RQSRMENSRY SSLRQCRLEV KEVEMLYKKE
RIPFVNTTNH SVEEIATKIL DITGLERHMF
|
|---|
| |