| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2296 |
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| Symbol | |
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| ID | 4279208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2738056 |
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| End bp | 2741127 |
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| Gene Length | 3072 bp |
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| Protein Length | 1023 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638135093 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_750980 |
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| Protein GI | 114563467 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATAA ATAATAAGTC CTCTATGTTA CCTTTGCTAT CACATAAACA AACATTAGAA
CCTATCTATC TTGAGTATCT TGACGCGCTT GAACAAAGCG AGTTTGAAGG TGAAATAGAC
AAGCGTTACA GTGCGCGGCT TATTCAGGCA ACCGACAATT CGGTGTATCA ATTTTTGCCT
CAAGCGGTGA TATACCCTCT ACATCAACAA GATGTTGAGT TGGTATTATC GTTAGCAGCA
CAACCACAAT ATAAACAAGT GACCTTTAGT GCGCGTGGCG GCGGAACAGG GACTAATGGC
CAATCGCTTA CCCACGGATT AATTTTAGAT GTGTCACGCC ACTTAAACCA AGTGCTAGAA
ATTAATGCCG AGGAAGGTTG GGCGAGGGTG CAAGCCGGTG TAGTGAAAGA TGCGTTAAAT
GATGCCTTAC GTCCACATGG ATTCTTTTTC AGTCCAGACT TATCAACCTC AAACCGTGCA
ACCGTTGGTG GTATGGTCAA TACCGATGCA TCTGGTGCCG GTTCATTAGT TTACGGTAAA
ACCTCCGATC ACGTATTAGG CATAACCAGT GTACTGATTG ATGGCAGCGT ATTAACCACC
ACACCAATTG ACCAAGACAA GTTGGCCGAT CAACCTTTTG GTGACAACTC ACTCGGCAAT
AGCATTGCTA GCCAAATAGC AGAAGTTTGC CGCGTAAAGC GTGACACCAT CATTGAGCGT
TTTCCAAAGT TGAATCGTTT TCTCACGGGC TATGATTTAA AGCATGTGTG GAATGATGAT
TTAAGCCAGT TTGATTTATC ACGTATTTTA ACGGGCTCAG AAGGTACGCT TGCGGTGATC
ACCGAAACCA AGCTTAACCT GACTCCATTG CCGAAAACCC GCATGATGGT CAACATCAAA
TATGATTCAT TTGAATCCGC GTTACGTCAT GCCCCGTCAT TGGTACAGGC TAAAGCAACG
GTAGTTGAAA CCGTTGACTC AAAAGTACTT AACCTTGCTC GCGAAGACAT TATTTGGCAT
TCGGTTGCCG ATCAAATTAA AGCGGTACCT AATAAGATCA TCGAAGGTCT TAATATGGTT
GAGTTCGCTG GCGAAGATGA CGATGTTAAA CATAAAGTCG CTCTGCTTGA GGAGATGCTC
AGTGAGCAGC TAAGCCAACA ACAATTTGGT TTAGTGGGTT TTCAAGTTAT TACCGACAGA
ACGGATATTG ACAGTATCTA TGCCATGCGC AAAAAGGCCG TGGGTTTATT GGGCGCAACA
AAAGGCAGCC GTAAACCGTT AGCGTTTGCC GAAGATACCG CCGTACCACC AGAAAACCTA
GCCGACTATA TTATGGAGTT TCGTGCGCTG CTCGATAGCC ATAATTTGCA ATACGGTATG
TTTGGTCATG TGGATGCTGG TGTGTTGCAC GTGCGACCCG CATTAGATAT GTGTGATGTT
GCCGACGAGC AATTACTGAA AGTGATATCA GATCAAGTTG CCGCATTAAC GCTTAAGTAT
GGCGGCTTAA TGTGGGGAGA ACACGGTAAA GGGGTTCGTG GTGAATACGG GCCTGCGGTA
TTTGGTGATG AGCTTTATGC CGTGCTTGAG CAAATTAAAG GGTTATTTGA CCCAGATAAC
CGTCTTAATC CAGGCAAATT AGTGGCGCCA CCTAAATCTG GTCCATTAAT GTTTAATGTC
GACAGCGCAA AACGCGGCAG TTTCGACAGA CAAATCCCTG TTCAAGTGCG TGATGCTTTC
CCTGATGTGA TGAACTGTAA CGGTAATGGG TTATGTTTTA ATTACAGTAG TTATTCACCC
ATGTGTCCGT CATTTAAAGT CACTGGCGAT AGAGTGCAAT CACCTAAAGG CCGTGCTGGG
TTAATGCGCG AATGGTTGCG ATTACTTGAA GCCGAAGGTG TTGATGTTGA CGCGTTAGCA
AAATCTAAAC CACTAGGGTG GATGCAGCGT ACTCAAAATA CCCTCAATAA CCAGCGTGAC
TATGATTATT CGCACGAAGT CATGGAATCA CTTAAAGGCT GTTTAGCCTG TAAAGCCTGT
TCGGGTCAGT GCCCAGTTAA AGTCGATGTG CCTAAGTTTA GAGCCCAGTT CTTTAATATT
TATTACAAAC GCTATTTACG CCCAGCCAAA GACTATTTAG TTGCAGGTAT CGAAGACTCA
CTACCACTGA TGGCCGCAAT GCCTAAATTA ACCAATTTGG CCTCGCAAAA TCCGCTGAGC
CAGTGGGTTA TTAAAAAAGC CATTGGTTAT GTAGATGCGC CTAAATTATC TGTACCTACG
CTAAAACAGC GTTTAGATGG TCATGCTAGC CGTGGTTATG ACTTAGATGC GCTATGCGCG
ATCCCACAAG CGCAGCGCAG TCAACATGTA TTAGTAGTAC AAGATCCATT TAACAGCTTT
TACGATGCAG GTTTGGTTTA TCGTTTTATT CAATTAATCG AAAAGCTAGG CTTTAAACCG
GTATTACTGC CCTTTAAACC AAACGGTAAA CCGACTCATA TTAAAGGCTT TTTAGACAAG
TTTGCCAAAA CAGCGCAAAA CAGTGCTGAT TTCTTAAACC GCGTACATGC CCTTGGCATG
CCGATGGTGG GGTTAGACCC TGCATTAGTG TTATGTTATC GCGACGAATA CAAAGAAGTC
TTAGGTCAGC GTCGTGGACC GTTTGAGGTA TTATTGGCCA ATGAATGGTT AACCGATGTT
GTGGCAAGCC GCAATGATGT GCCAGTCGTT GATAGTGATG CACCACAATT TACTTGGTTT
AGTCATTGTA CTGAATCGAC CGCCAAACCT AATACGGCCA ACGAATGGAA AGCAATATTC
AGCCATTTTG GTGCTAAACT CAACAGCGTT AATTTAGGCT GTTGTGGTAT GGCCGGTACT
TATGGGCATG AACTTGAAAA CCTCGAGCGT TCGGAACAGT TATTTGAAAT GTCTTGGCAA
CCAAGCATTG AAAAAATTGC TGAAAATAGC CAAGTGTTGG TGTCGGGTTA TTCATGTCGT
AGCCAAGTAA AACGTTTTGC AGGTTTTAAG CCGCAACATC CTATTGAAGC GTTACTTAAA
TTACTCGAGT AG
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| Protein sequence | MPINNKSSML PLLSHKQTLE PIYLEYLDAL EQSEFEGEID KRYSARLIQA TDNSVYQFLP
QAVIYPLHQQ DVELVLSLAA QPQYKQVTFS ARGGGTGTNG QSLTHGLILD VSRHLNQVLE
INAEEGWARV QAGVVKDALN DALRPHGFFF SPDLSTSNRA TVGGMVNTDA SGAGSLVYGK
TSDHVLGITS VLIDGSVLTT TPIDQDKLAD QPFGDNSLGN SIASQIAEVC RVKRDTIIER
FPKLNRFLTG YDLKHVWNDD LSQFDLSRIL TGSEGTLAVI TETKLNLTPL PKTRMMVNIK
YDSFESALRH APSLVQAKAT VVETVDSKVL NLAREDIIWH SVADQIKAVP NKIIEGLNMV
EFAGEDDDVK HKVALLEEML SEQLSQQQFG LVGFQVITDR TDIDSIYAMR KKAVGLLGAT
KGSRKPLAFA EDTAVPPENL ADYIMEFRAL LDSHNLQYGM FGHVDAGVLH VRPALDMCDV
ADEQLLKVIS DQVAALTLKY GGLMWGEHGK GVRGEYGPAV FGDELYAVLE QIKGLFDPDN
RLNPGKLVAP PKSGPLMFNV DSAKRGSFDR QIPVQVRDAF PDVMNCNGNG LCFNYSSYSP
MCPSFKVTGD RVQSPKGRAG LMREWLRLLE AEGVDVDALA KSKPLGWMQR TQNTLNNQRD
YDYSHEVMES LKGCLACKAC SGQCPVKVDV PKFRAQFFNI YYKRYLRPAK DYLVAGIEDS
LPLMAAMPKL TNLASQNPLS QWVIKKAIGY VDAPKLSVPT LKQRLDGHAS RGYDLDALCA
IPQAQRSQHV LVVQDPFNSF YDAGLVYRFI QLIEKLGFKP VLLPFKPNGK PTHIKGFLDK
FAKTAQNSAD FLNRVHALGM PMVGLDPALV LCYRDEYKEV LGQRRGPFEV LLANEWLTDV
VASRNDVPVV DSDAPQFTWF SHCTESTAKP NTANEWKAIF SHFGAKLNSV NLGCCGMAGT
YGHELENLER SEQLFEMSWQ PSIEKIAENS QVLVSGYSCR SQVKRFAGFK PQHPIEALLK
LLE
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