Gene Sfri_2295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2295 
Symbol 
ID4279207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2737576 
End bp2738046 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content41% 
IMG OID638135092 
Producthypothetical protein 
Protein accessionYP_750979 
Protein GI114563466 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGATG AAACAGCGAC ATTAAGTACA TTTACTCAAC CTGATGGTGT GGCACTGTGC 
AGTGATGATG TTCTGTTTCA TATTCAAGCC AATGGCGATT GGCTGTATCT AGACAGTCCG
TTGCCAGCAA AATTTGCGGC TTTGTTCAGT AGTATTTTGC ACTGTATCGA CAATGAGTAT
TTGTTAATTA CACCAGTCGA GAAAGTCAAA GTCACCGTTG AAGCCTATCC ATTCCTGCTG
GTGGACTATC AAGATACATC TTTGGATGGT GATTCAAACA ATCAACTGAT ATTTACCAGC
AGCATAGGTA CGCAGCTCTC AGCCATTAAT ATCGCAGATA TTATCGTCAC AGACGATGGT
ATTTACGCAC CATTAATCAG AGGCTTGGTA GGGCAATTAA ACCGAGCCTG TTATTACCGC
TACATAAACG AGTACTTATC TTTTGACTCG GTTAACCTTA GCTCAAAATA A
 
Protein sequence
MTDETATLST FTQPDGVALC SDDVLFHIQA NGDWLYLDSP LPAKFAALFS SILHCIDNEY 
LLITPVEKVK VTVEAYPFLL VDYQDTSLDG DSNNQLIFTS SIGTQLSAIN IADIIVTDDG
IYAPLIRGLV GQLNRACYYR YINEYLSFDS VNLSSK