| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2290 |
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| Symbol | |
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| ID | 4279202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2730223 |
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| End bp | 2731932 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638135087 |
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| Product | putative monovalent cation/H+ antiporter subunit D |
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| Protein accession | YP_750974 |
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| Protein GI | 114563461 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGTTTG AATTTTTCTC TCCAGCATTT ATCCTGCTAA TTGCTGCTGT ACTGATATGT
TTTGTTAAAG GGCACGCACG AACAGCAGTT ATATTAATCG CCCCAATTAT TACCCTGTTG
GCCATATGGC AGATCCCTGA CGGAGTCCAG AGTACGGTAA AATTTCTTTC GTACAACATT
GAACCTGTCG AAGGTAGTCC GCTAAGGCGA TTGTTTGCGA CTATTTTTAC AATAATGGTC
TTTGTTGGAG GTCTCTTTTC TTTTCGTATA GCACGTTGGT ATGAACTTGC CGCAGCCTTT
ACATACGCTG CAGGTGCTAT AGGAGTCTGT TTTGCCGGCG ATCTTATTAC CATGTTCGTC
TACTGGGAAC TAATGGCGAT ATTCTCTACT ATTGTGGTTT GGTGTGGTGG TACGCCCGAT
TCACGCGCAG CTGGAATACG GTATGCCATA ATGCATTTTC TCGGTGGCGT AATACTTAAA
GTTGGAATTG TAGGTGTTGT ACTTGGGACT GGTTCTATCC AAATCCAACC TATGCTGGCA
ACAGATTTCA GTACATGGAT GATACTTATT GGCATATTGA TAAACGCCGC GGCACCACCA
GTGTCAGCTT GGCTAGCCGA TGCATACCCA GAAACCACAC CCACTGGTTC AGTATTTCTG
TCGGCATTTA CAACTAAAAC AGCTGTATTG GCACTGATAT TATTATTCCC AGGCGAACCT
GTGCTGATTG GCATAGGTCT GTTTATGGTT ATGTACGGTA TTATTTTCGC ATTATTGGAA
AATGATGTGC GACGTATCCT TTCCTACTCC GTGGTTAACC AAGTCGGTTT TATGGTTGTT
GCCGTAGGTA TTGGTACCGA AATGGCACTT AATGGGGCTA CGGCTCATGC TTTTGCACAT
ATTATATATA AAGCGCTACT GTTTATGAGT GCTGGGGTTG TTATATACCG CACTGGGAAA
AATAAATGTA TGGAGCTGGG TGGTCTATTT CGCACCATGC CACTTACCTG CGTCTGCGGT
ATTATTGGCG CGCTAGCAAT TTCAGGTTTT CCACTGACGT CAGGTTTTAC CACAAAGAGC
ATGATTTCCC AGGCAGCTGT CGATGGGGAT TTAGTTTGGG TTTACATGGC GTTAACCGCC
GCATCGGCCG GTGTATTTCT TCATGCTGGC ATCAAATTCC CATGGTTTGT GTTTTTCCAA
AAAGACTCAG GTTTAAGGCC AAAAGATGCG CCATGGAATA TGGGGTTGGC GATGATCATT
TTTGCTAGCA TGTGCATTTT ACTGGGTGTG TTCCCAGAAA CGCTTTATGC CCTATTACCC
TACCCTGTTG ACTACCAACC GTACTCTATT GGTAAAGTGC TGTTCTACCT GCAGTTGCTG
CTATTTTCAG GATTGGCTTT CTTCGTATTA TTGCCACTAA TGAAACGTAC CATGACGATT
AGCCTCGATA CAGATTGGCT TTGGCGACGT GCGGCCTTTT CATTGGTTAA GTTGATCGAA
CGAGCACTTA GCTCACTAGG TGAAATGGTT ACGCAACAAC GAAACCGCTT GCAGAAATTC
TTACAACGTA TGGCAGTGCG TTATCTAGGC CAACCGCATA CAGCAGATAG CCAAGAGCGC
GGCGTGTTCG CGCGCTCTTG GCCCGTGGGC ACTACTGTGC TTTGGATCGC TGGGTTGCTA
TCAGCCTACG TGTTGTTGTA CTACTTGTAG
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| Protein sequence | MGFEFFSPAF ILLIAAVLIC FVKGHARTAV ILIAPIITLL AIWQIPDGVQ STVKFLSYNI
EPVEGSPLRR LFATIFTIMV FVGGLFSFRI ARWYELAAAF TYAAGAIGVC FAGDLITMFV
YWELMAIFST IVVWCGGTPD SRAAGIRYAI MHFLGGVILK VGIVGVVLGT GSIQIQPMLA
TDFSTWMILI GILINAAAPP VSAWLADAYP ETTPTGSVFL SAFTTKTAVL ALILLFPGEP
VLIGIGLFMV MYGIIFALLE NDVRRILSYS VVNQVGFMVV AVGIGTEMAL NGATAHAFAH
IIYKALLFMS AGVVIYRTGK NKCMELGGLF RTMPLTCVCG IIGALAISGF PLTSGFTTKS
MISQAAVDGD LVWVYMALTA ASAGVFLHAG IKFPWFVFFQ KDSGLRPKDA PWNMGLAMII
FASMCILLGV FPETLYALLP YPVDYQPYSI GKVLFYLQLL LFSGLAFFVL LPLMKRTMTI
SLDTDWLWRR AAFSLVKLIE RALSSLGEMV TQQRNRLQKF LQRMAVRYLG QPHTADSQER
GVFARSWPVG TTVLWIAGLL SAYVLLYYL
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