| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2286 |
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| Symbol | |
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| ID | 4279198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2726963 |
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| End bp | 2728276 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638135083 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_750970 |
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| Protein GI | 114563457 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAT TAGCACACCT TCCTGCTTTG CAAGTTGTGA TACCGATGTT GTCGGCACCA
CTTATCGTCA TGTTACAACC GCGAGGTTTA GCTTGGGCCG CAGCAACTGC CGCTGCACTA
GTTAGTTTTT CCATCGCCGT TGCGCTCACT TTGGCTGTTT TAGACGGACA AGCCCTCCAA
TACGCTATGG GGGGCTGGCC GGCACCTTAT GGCATAGCAC TGTCGGTTGA TACGTTTAGT
GCCATTATTT TGCTGGTGAT CACGGGAGCC AGCACAGCAG CCTTACTCGC TGCCAAACCA
AGTATTGATC AGCAAATAGA ATTAGAACGC CAACCACTTT TCTATGCGGC TTGGCTTTTG
GTTTTATCTG GACTGGTGGG TATTGTCGTA TCAGCAGATG CCTTCAATAT TTTTGTTTTC
ATGGAAATTT CATCTCTTGC CAGCTACATA TTAATAGCTG GAGGTCCAGA CCGTCGGGCT
CTTCCAGCCG TTTTCAAATA TCTAATGATG GGCACTATTG GCGCAACCTT TTATCTAATT
GGTGTAGGTC TAATCTACAT GATGACCGGC ACGCTTAACT TAGCCGATAT TCAAGATCGC
CTCGGTGATG TGACCGATAT AAATCCAGTT TTAGTTGCTG CTGGATTCAT CACTATTGGG
TTGGCCCTTA AAGCTGCTGT GTTTCCTTTG CATGTATGGG TTCCAAACGC TTATACACAT
GCTCCGCACA TGGTAACCGT GTTTCTCGCT GCTTGCGCGA CCAAGGTTGC ACTGTATGTA
CTTATCCGAT TTGACTATAT GGTATTTCAA GCCACGCTTG AGGATCACGA AGTTCAGTTC
GCATTGTTTG CGATGCCATT GGCAATTCTC GGAATACTTA TTGCTTCTGC AGTTGCGATG
TTCGAAGGAC ATCTTAAAAG GCGGCTTGCT TCATCATCTA TAGCACAAAT AGGCTATATT
TTGCTTGGCG TTAGCTTTGT AAGCATGGCT GGACTAAGCG CCAGCGCAAT GCATATGTTC
AACCATGCGC TAGCAAAAGG TGGGTTGTTC CTGGCAGTTG CTTGCCTAGC TTATCAGTAT
CGTGACTTGC GCCTAGATCA ACTCGGTGGT GCTGCAGCTC GTATGCCCTG GACTTGTGCT
GCTTTTGTTG TGTGTGGTTT GAGCTTAATC GGCGTGCCTG GTACTGCAGG GTTTATTAGT
AAATGGCTCC TTATCACCGC AGCTTTGGAA AGCGGTCCTT GGGGGGGGGG GGCTAGTAGC
AATTATTCTA GTCAGTTCCT TGATGGCGGT GGTTTATGTT TGGCGCATCG TTGA
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| Protein sequence | MDLLAHLPAL QVVIPMLSAP LIVMLQPRGL AWAAATAAAL VSFSIAVALT LAVLDGQALQ
YAMGGWPAPY GIALSVDTFS AIILLVITGA STAALLAAKP SIDQQIELER QPLFYAAWLL
VLSGLVGIVV SADAFNIFVF MEISSLASYI LIAGGPDRRA LPAVFKYLMM GTIGATFYLI
GVGLIYMMTG TLNLADIQDR LGDVTDINPV LVAAGFITIG LALKAAVFPL HVWVPNAYTH
APHMVTVFLA ACATKVALYV LIRFDYMVFQ ATLEDHEVQF ALFAMPLAIL GILIASAVAM
FEGHLKRRLA SSSIAQIGYI LLGVSFVSMA GLSASAMHMF NHALAKGGLF LAVACLAYQY
RDLRLDQLGG AAARMPWTCA AFVVCGLSLI GVPGTAGFIS KWLLITAALE SGPWGGGASS
NYSSQFLDGG GLCLAHR
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