| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2275 |
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| Symbol | |
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| ID | 4279187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2720265 |
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| End bp | 2721134 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135072 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_750959 |
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| Protein GI | 114563446 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0234107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATAAAT TAACCGCGAT GCAGGTGTTT AGTCATGTGG CTGAGCAGGG CAACTACGGC
ACAGCTGCGC ATAAATTTAA TATCAGCCGG ACTATGGTGA GTAAACACAT TAATCAGTTA
GAGGCCTACC TTGGGGTTAA GTTGATTAAC CGTACTACTC GTCAACAAGA ATTAACGGAA
TCAGGCCACG TTTATTACCA AGAATGCCAG ATAATCTTGA TGGCTATTGA GCAAGCTGAA
AACACGCTGC AGTCGATGAG TTCGACGCCA AAAGGCACCA TTAGAATTAA TGCTCCAGTG
AGTTTTGGCA ATATTGTGCT GGCACCGATA GTGAATCAAT TTTTACTGCA ATATCCGCAA
ATTGATGTAG AGCTGCGACT TGATAATAAT CTAATCGATC CCATGGTCGA TCATGCTGAT
GTGGTGGTCA GAATTGGCAA TCTTGATGAC TCTGCGTTAA TTGGCAGGCA TATTATGAAT
TATGAAATGG TATTTTGTGC TTCGCCTCAC TATTTAGCTC AACACTCGCC AATAGCGTCA
ATTAGCGATT TACCTCAGCA TGATTGTTTA GGCTTTAGCT ATTCGAAAAG TGCTTCATTA
GCGGTTGCCC ATAGCCAGTT GTTTGGTAAA CGCAGCTTTA GATTGTTGTC CAATAGTGGC
TTGGTATTAA TCCAAGCCGC GATAGATGGA CTGGGCATTA TTTTACAGCC ACAGATTGTG
GTGCAAGAGG CAATTCAAGC TGGATTATTA ATAAATGTCA GCGCATTAAT ACCTCCAGAT
GCGATGCCAA TACACTTATT ATATAAAGAC AAAAATCTGC CATTAAAAAC ACGAACTTTG
ATTGATTTTA TTATTCGCCA GCTCGAATAA
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| Protein sequence | MDKLTAMQVF SHVAEQGNYG TAAHKFNISR TMVSKHINQL EAYLGVKLIN RTTRQQELTE
SGHVYYQECQ IILMAIEQAE NTLQSMSSTP KGTIRINAPV SFGNIVLAPI VNQFLLQYPQ
IDVELRLDNN LIDPMVDHAD VVVRIGNLDD SALIGRHIMN YEMVFCASPH YLAQHSPIAS
ISDLPQHDCL GFSYSKSASL AVAHSQLFGK RSFRLLSNSG LVLIQAAIDG LGIILQPQIV
VQEAIQAGLL INVSALIPPD AMPIHLLYKD KNLPLKTRTL IDFIIRQLE
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