Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2268 |
Symbol | |
ID | 4279180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2715407 |
End bp | 2715865 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135065 |
Product | signal transduction protein |
Protein accession | YP_750952 |
Protein GI | 114563439 |
COG category | [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.220391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAACTT CTACTGAAAT GTTAGCTGAG ACATTACCTG ATACCCCGAC TAAACATCTC TGTGTCGCGG ACATCATGAC TACGCGAGTG GTTACCATTG AAATGGATGA TCGGTTAATA CTGGCAAAAG AAATTTTCGA CAATGTCAGC TTCCATCATT TATTAGTGGT TGATAACGAG CAACTGAGTG GAATATTGTC TCATCGGGAC TTTCTACGAG CGCTCAGTCC TAATATCGGT ACCGCTGCTG AATTAATGCG AGACACTGAA ACCCTGCAAA AAAGGGTTCA TCAAGTCATG ACTCACAATC CATTCACCAT CGCCCCTCAT TGCGATATCA ATCAAGCAAC CAAGCTTATT TTAGACCACG ATATAGGATG TTTACCGGTA TTAGACAACA ATGTCATCGT GGGCATTATT ACTTGGAAAG ATCTATTGAA TGCCTATTAC GTTAAGTAA
|
Protein sequence | MTTSTEMLAE TLPDTPTKHL CVADIMTTRV VTIEMDDRLI LAKEIFDNVS FHHLLVVDNE QLSGILSHRD FLRALSPNIG TAAELMRDTE TLQKRVHQVM THNPFTIAPH CDINQATKLI LDHDIGCLPV LDNNVIVGII TWKDLLNAYY VK
|
| |