| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2262 |
|---|
| Symbol | |
|---|
| ID | 4279174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 2707876 |
|---|
| End bp | 2709246 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638135059 |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_750946 |
|---|
| Protein GI | 114563433 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTTT CCGCACTAAC TGCTATCTCT CCGGTAGACG GTCGTTATGG TAGTAAAACC
GCCTCATTAA GAGGGATTTT CAGCGAGTTC GGTCTTACTA AGTACCGTGT TCAAGTTGAA
ATCAACTGGT TAAAGCTATT ATCTAGCTGC CCAGAGATTG AAGAAGTTCC CCCTTTTAGC
GAAACCGCCC TTGCCGTGCT AGACAGCATC AAGGACAACT TTAGCGAACA AGACGCTCTA
CGCGTTAAAA CGATTGAAAG CACCACCAAT CACGACGTTA AAGCGGTTGA GTATTTTATT
AAAGAACAAA TTGCCAATAA TGCCGAGTTA GTCGCCATTG ATGAATTTGT CCATTTTGCC
TGTACCTCTG AAGACATTAA CAACTTATCT CATGGCTTAA TGTTAAAAGA AGCGCGTGAA
CAAGTGTTAG TGCCGCATTG TCAGCAAATT ATTGATGCCA TCAAAAAGTT AGCGCATGAC
AATAAAAGCG TGCCATTAAT GTCACGTACT CATGGTCAGC CAGCATCGCC ATCAACGTTA
GGCAAAGAAA TGGCTAACGT TGCGGTACGT TTAGAGCGTC AATTAAACCA AATCAACGCT
GTTGAAATTA TGGGTAAAAT TAACGGTGCA GTCGGTAACT ACAACGCACA CATTTCTGCA
TACCCAGAAG TAAACTGGCA TGAGTTGTCA CAGCGTTTTG TCACCAGCCT TGGCATTAAT
TGGAACGCAT ATACCACTCA GATTGAGCCG CATGATTACA TTGCTGAATT GTTCGATGCC
ATTGCTCGTT TCAACACCAT CCTAATCGAT TTTGATCGTG ATATTTGGGG TTATGTTGCA
CTAGGCCACT TTAAGCAGCG CACTATCGCA GGCGAAATTG GTTCATCAAC GATGCCGCAC
AAAGTCAATC CAATTGATTT TGAAAACTCT GAAGGTAACT TAGGTATCGC TAACGCGCTA
ATGCAACATT TAGCCGCTAA ATTACCCGTT TCAAGATGGC AACGTGACCT AACTGACTCA
ACCGTATTAC GTAACTTAGG TGTCGGTATG GCTCACTCGT TAATTGCTTA TCAAGCAACC
TTGAAAGGCA TTAGCAAGTT AGAAGTGAAT GAAGCACAAC TTTTAGCAGA ACTAGACAAA
AACTGGGAAG TATTGGCCGA GCCAGTGCAA ACCGTAATGC GTCGTTACGG TATTGAAAAA
CCGTATGAGA AGTTAAAAGA ACTGACGCGT GGCAAACGTA TTGATGCAGC ACAACTTGCA
GTATTCATCG ATGGTCTTGA ATTACCAGAA CACGTAAAAA TTGAATTAAA AAAGATGACC
CCAGCAAACT ACATTGGCCG CGCAGAAGCC TTTGTTGATG AGCTAAAATA G
|
|---|
| Protein sequence | MDLSALTAIS PVDGRYGSKT ASLRGIFSEF GLTKYRVQVE INWLKLLSSC PEIEEVPPFS
ETALAVLDSI KDNFSEQDAL RVKTIESTTN HDVKAVEYFI KEQIANNAEL VAIDEFVHFA
CTSEDINNLS HGLMLKEARE QVLVPHCQQI IDAIKKLAHD NKSVPLMSRT HGQPASPSTL
GKEMANVAVR LERQLNQINA VEIMGKINGA VGNYNAHISA YPEVNWHELS QRFVTSLGIN
WNAYTTQIEP HDYIAELFDA IARFNTILID FDRDIWGYVA LGHFKQRTIA GEIGSSTMPH
KVNPIDFENS EGNLGIANAL MQHLAAKLPV SRWQRDLTDS TVLRNLGVGM AHSLIAYQAT
LKGISKLEVN EAQLLAELDK NWEVLAEPVQ TVMRRYGIEK PYEKLKELTR GKRIDAAQLA
VFIDGLELPE HVKIELKKMT PANYIGRAEA FVDELK
|
|---|
| |