| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2257 |
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| Symbol | |
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| ID | 4279169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2702003 |
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| End bp | 2704228 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135054 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_750941 |
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| Protein GI | 114563428 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATA ACACTCCAAC GATCATATAC ACAGAAACCG ACGAAGCACC GGCACTTGCC
ACGCTGTCTT TATTACCGAT TATCCGTACC TTCACTAACG CTGCAGGCGT AAAAGTTGAA
ACGCGCGATA TCTCTTTGTC AGGTCGTGTT ATTGCTAACT TCCCTGAAAA ATTAACCGCA
GAGCAAAAAA TTGCTGATGC GCTAACCGAA TTAGGCGAAT TGGCTAATAA GCCAGAAGCT
AACATCATTA AATTACCTAA CGTTAGTGCG TCAATTCCGC AGTTAAAAGC CTGTATTGCT
GAACTTCAAG CAAAAGGTTA TGACATTCCT AACTATCCTG ATGAGCCTAA AAATGACGCA
GAAGTTGAAG CTCAATCGCG TTATGACAAA ATTAAAGGCA GTGCGGTAAA CCCAGTATTA
CGTGAAGGTA ACTCAGATCG TCGTGCACCG ACTTCAGTGA AAAACTACGC CAAGAAAAAC
CCACATTCAA TGGGTAAATG GGCCAGCGAC TCTAAGTCTC ACGTTGCTCA CATGAATGAA
GGCGACTTCT ACGGTAGTGA ACAGTCTGTC ACTCTAGCGG CAGCTGATAA AGTCAATATC
GTGTTGACTC AACAAGACGG CAAAGACGTT GTATTGAAAA GCGGCTTAGC GTTATTAGCG
GACGAAATTA TTGACTCATC AGTGATGAGC AAAAAAGCGT TAGTGGATTT TTATGCTCGT
GAAATCGAAG CGGCAAAATG TGAAGATGTT TTACTATCTT TACACCTTAA AGCGACCATG
ATGAAAGTGT CTGACCCAAT ATTATTTGGT CTTGCCGTTA AAGTGTTCTT TAAAGATGTG
TTCGATAAGC ACGGTAAATT ATTTGCTGAG CTAGGCGTTG ATGTAAACAA TGGTTTTGGT
GATGTTTATG CCAAAATCAG TACGTTACCA GAAGCTAAAC GTAACGAAAT TGAAGCAGAT
ATTGCTGCTG TTTATGCTGC TCGTCCAGCA CTTGCGATGG TTGATTCTGA TAAAGGTATC
ACTAACTTAC ACGTACCTAG TGACATCATT ATTGATGCAT CAATGCCTGC AGCTATCCGT
TCTTCGGGTA AAATGTGGGG TCCTGATGGC CAGTTACAAG ACACCAAAGC AATGATCCCA
GATCGTTGTT ACGCTGGTGT TTATCAAGAA ACCATTTCGT TCTGTAAAAA GCACGGCGCA
TTTGACCCAA CAACTATGGG CAGCGTGCCT AACGTGGGCT TAATGGCTCA AAAAGCAGAA
GAGTACGGTA GCCACGATAA AACGTTTGAA ATTAAAGCTG CTGGTACGGT TAACGTGATT
AACCAAGCTG GCGATGTGTT AATGAGCCAT AACGTTGAAG CTGGCGATAT CTATCGTATG
TGCCAAGTCA AAGATGCACC AATTCGTGAC TGGGTTAAAC TTGCGGTTAA GCGTTCACGT
TTAAGCAATA CGCCTGCGGT ATTCTGGTTA GATAGCAACC GTGCTCACGA TGCTGAGTTA
ATTAAAAAAG TCACTCAATA TTTAGCTGAA CAAGATACTG CTGGTTTAGA CATTCAAGTG
ATGTCACCAG AAGATGCTAC TCGCTTTACG CTAGAGCGCA TTATCAAAGG TGAAGACACT
ATTTCGGTAA CGGGTAACGT GTTACGCGAC TACTTAACCG ATTTATTCCC AATTCTTGAA
CTGGGAACAA GTGCGAAAAT GTTGTCTATC GTGCCGTTAA TGAATGGTGG CGGCTTATTT
GAAACAGGTG CCGGTGGTTC AGCGCCTAAG CACGTGCAAC AAGTCGAAAA AGAAGGTCAT
TTACGTTGGG ATTCATTAGG GGAGTTTTTA GCTCTTGCTG CGTCTTTAGA GCATTTAAGT
CAAACGACCA ACAATGCTAA AGCACAAGTA TTAGCAGATA CCTTAGATGT TGCTATTGGT
GTGTTTCTTG ATACCAATAA ATCACCGTCT CGTCGTGTAG GTGAACTCGA TAACCGCGGT
AGTCACTTTT ACCTAGCGAT GTATTGGGCA CAAGCATTAA CTGAGCAAAC GGCTGATCCC
GAGCTTGCTG CACACTTTGC ACCTTTAGCT AAGTCATTGG CTGCAAATGA AACCGTTATT
CTTGCTGAAT TGAACGGTGC TCAAGGCCCT GCAGTTGATT TAGGCGGTTA TTACCGTTTA
GATGCTGCTA AAGCCGAACA AGCAATGCGC CCTAGTGCAA CTTTAAACCA GTTTGTAATT
GGTTAA
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| Protein sequence | MKDNTPTIIY TETDEAPALA TLSLLPIIRT FTNAAGVKVE TRDISLSGRV IANFPEKLTA
EQKIADALTE LGELANKPEA NIIKLPNVSA SIPQLKACIA ELQAKGYDIP NYPDEPKNDA
EVEAQSRYDK IKGSAVNPVL REGNSDRRAP TSVKNYAKKN PHSMGKWASD SKSHVAHMNE
GDFYGSEQSV TLAAADKVNI VLTQQDGKDV VLKSGLALLA DEIIDSSVMS KKALVDFYAR
EIEAAKCEDV LLSLHLKATM MKVSDPILFG LAVKVFFKDV FDKHGKLFAE LGVDVNNGFG
DVYAKISTLP EAKRNEIEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR
SSGKMWGPDG QLQDTKAMIP DRCYAGVYQE TISFCKKHGA FDPTTMGSVP NVGLMAQKAE
EYGSHDKTFE IKAAGTVNVI NQAGDVLMSH NVEAGDIYRM CQVKDAPIRD WVKLAVKRSR
LSNTPAVFWL DSNRAHDAEL IKKVTQYLAE QDTAGLDIQV MSPEDATRFT LERIIKGEDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH
LRWDSLGEFL ALAASLEHLS QTTNNAKAQV LADTLDVAIG VFLDTNKSPS RRVGELDNRG
SHFYLAMYWA QALTEQTADP ELAAHFAPLA KSLAANETVI LAELNGAQGP AVDLGGYYRL
DAAKAEQAMR PSATLNQFVI G
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