Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2256 |
Symbol | |
ID | 4279168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2701641 |
End bp | 2701847 |
Gene Length | 207 bp |
Protein Length | 68 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638135053 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_750940 |
Protein GI | 114563427 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAACG GAACTGTTAA ATGGTTCAAC AACGCCAAAG GATTCGGGTT TATTTGCCCT GATCAGGGTG GCGAAGATGT ATTTGCGCAC TATTCAACTA TCGAAATGGA AGGTTATCGT ACCTTAAAAG CAGGTCAACC TGTGTGCTTC GAAGTTGAAG AAGGCCCTAA AGGAATGCAT GCTTCAGCCA TCTCGCCAAC AATTTAA
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Protein sequence | MANGTVKWFN NAKGFGFICP DQGGEDVFAH YSTIEMEGYR TLKAGQPVCF EVEEGPKGMH ASAISPTI
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