Gene Sfri_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2246 
SymbolmetG 
ID4279158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2690305 
End bp2692356 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content41% 
IMG OID638135043 
Productmethionyl-tRNA synthetase 
Protein accessionYP_750930 
Protein GI114563417 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.140646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAT CACAGCGTAA AATACTGGTC ACAAGTGCCC TTCCTTATGC CAATGGCCCA 
ATCCATCTAG GCCACATGCT TGAATATATC CAAACGGATA TTTGGTCACG TTTTCAAAAG
TTACGTGGAC ATGAATGCCA CTACATTTGT GCCGACGATG CTCACGGCAC GCCGATTATG
CTTAAAGCAC AGCAAATGGG CATTACGCCA GAAGAAATGA TTGCCCAAGT GCAAAAAGAG
CACCAGCAAG ATTTCGCTGA CTTCAATATC CAGTTTGATA ACTTTCACAG CACTCACAGC
GAAGAAAACC GCATTTTAGC CAGTGATATT TATCTAAAAC TTCGTGATGG TGGTTACATC
AAAACCAAAA CCATTTCACA ATTATATGAT CCTGAAAAGT TAATGTTCTT ACCGGACCGT
TTTGTTAAAG GCACCTGCCC AAAATGTAAG TCTGAAGATC AATACGGCGA TAACTGTGAC
AACTGTGGTG CAACTTATAG TACGACCGAT TTGATAAACC CTAAATCGGC AGTCTCTGGT
GCGACACCAA TAATGAAAGA TACCGAACAC TTCTTTTTTG ACTTGCCAGC ATTTGAAGGC
ATGTTAAAAG AGTGGATCCA ATCAGGCTCT TTACAACAAG AAATGGCCAA CAAGCTTAAC
GAATGGTTTG AGCAAGGGCT AAAACAATGG GACATCTCAC GTGATGCACC CTACTTTGGT
TTTGAAATCC CTGATGCTCC CGGTAAATTT TTCTATGTTT GGTTAGATGC GCCTATTGGT
TATATGGGTT CATTTAAAAA CCTATGTGAC AAGCGTGATG ATTTAAACTT TGACGATTTT
TGGAGCCTAG ACTCAACCGC AGAGGTTTAT CACTTCATCG GTAAAGACAT TGTTTATTTC
CACAGTTTAT TCTGGCCAGC AATGCTTGAA GGCGCAGGTA TTCGTAAACC GACTAGTGTT
TATGCTCACG GCTATGTCAC CGTAAACGGT TCAAAAATGT CTAAGTCTAA AGGCACGTTT
ATTAAAGCGC GTACCTATTT AGATAATTTA GATCCGGAAT ACCTACGTTA TTATTACGCA
GCTAAATTAA ACAGTCGTAT TGATGATTTA GATTTAAATT TAGAAGATTT TGCTCAACGA
GTTAACTCAG ACTTGGTCGG TAAACTGGTA AACCTTGCAT CGCGAACTGC TGGCTTTATC
AGCAAACGCT TTGACGGCAA ATTAGCCAAG GTAACAGACA GCAGCTTAAC CGACATATTC
TTAGCTAAAA GCGAAGTGAT TGCCGAATTA TATGAAACTC GCGAATTTGG CAAAGCGATG
CGTGAAATTA TGGCATTAGC TGATATTGCC AACGCCTATG TTGCCGACGC AGCACCTTGG
CAACTGGTTA AGCAAGACGA TAAACAAGAT GAAGCACATC AGGTTTGCAG TAATGCATTA
AACTTGTTCA GAATCTTGGT CACTTACCTT AAGCCTGTAT TACCTAAACT GGCCGAAAAT
GTTGAAGGTT TTTTACAGTT AACCTTAACG TGGGACAATT TAGGTCAAGA TCTTGCTGGT
CATGAAATCG CGACATTCAA AGCATTAATG CAGCGTATCG AACCTAAGAG CATTGAAGCT
ATCATCGATG CCTCTAAAGA GAACTTGCAA GCGACTAATA CGGATGCACC TAAAACCGAA
GCGCCGACAC AAGCTGTTAA TCAATTAGAA CTCGATCCAA TTAGCCCTGA AATAAGCTTT
GAAGATTTTG CTAAAATTGA TTTACGTATT GCTCGAATCA GCAAAGCGGA ACATATTGAA
AAAGCCAATA AATTACTGCG TCTTGAATTA GACTTAGGCG GCGATACCAA ACAAGTATTT
GCGGGTATTA AATCAGCTTA TGCGCCTGAA GATTTGGTTG GTAAACTCAC CGTAATGGTG
GCTAACCTTG CCCCACGCAC GATGAAGTTT GGTGATTCAG AAGGTATGGT ATTAGCTGCC
GGTCCTGGCG GTAAAGATTT GTTTATACTA GAACCTCATG AAGGCGCACT GCCTGGCATG
CGAGTTAAGT AA
 
Protein sequence
MTKSQRKILV TSALPYANGP IHLGHMLEYI QTDIWSRFQK LRGHECHYIC ADDAHGTPIM 
LKAQQMGITP EEMIAQVQKE HQQDFADFNI QFDNFHSTHS EENRILASDI YLKLRDGGYI
KTKTISQLYD PEKLMFLPDR FVKGTCPKCK SEDQYGDNCD NCGATYSTTD LINPKSAVSG
ATPIMKDTEH FFFDLPAFEG MLKEWIQSGS LQQEMANKLN EWFEQGLKQW DISRDAPYFG
FEIPDAPGKF FYVWLDAPIG YMGSFKNLCD KRDDLNFDDF WSLDSTAEVY HFIGKDIVYF
HSLFWPAMLE GAGIRKPTSV YAHGYVTVNG SKMSKSKGTF IKARTYLDNL DPEYLRYYYA
AKLNSRIDDL DLNLEDFAQR VNSDLVGKLV NLASRTAGFI SKRFDGKLAK VTDSSLTDIF
LAKSEVIAEL YETREFGKAM REIMALADIA NAYVADAAPW QLVKQDDKQD EAHQVCSNAL
NLFRILVTYL KPVLPKLAEN VEGFLQLTLT WDNLGQDLAG HEIATFKALM QRIEPKSIEA
IIDASKENLQ ATNTDAPKTE APTQAVNQLE LDPISPEISF EDFAKIDLRI ARISKAEHIE
KANKLLRLEL DLGGDTKQVF AGIKSAYAPE DLVGKLTVMV ANLAPRTMKF GDSEGMVLAA
GPGGKDLFIL EPHEGALPGM RVK