Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_2246 |
Symbol | metG |
ID | 4279158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 2690305 |
End bp | 2692356 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638135043 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_750930 |
Protein GI | 114563417 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.140646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAT CACAGCGTAA AATACTGGTC ACAAGTGCCC TTCCTTATGC CAATGGCCCA ATCCATCTAG GCCACATGCT TGAATATATC CAAACGGATA TTTGGTCACG TTTTCAAAAG TTACGTGGAC ATGAATGCCA CTACATTTGT GCCGACGATG CTCACGGCAC GCCGATTATG CTTAAAGCAC AGCAAATGGG CATTACGCCA GAAGAAATGA TTGCCCAAGT GCAAAAAGAG CACCAGCAAG ATTTCGCTGA CTTCAATATC CAGTTTGATA ACTTTCACAG CACTCACAGC GAAGAAAACC GCATTTTAGC CAGTGATATT TATCTAAAAC TTCGTGATGG TGGTTACATC AAAACCAAAA CCATTTCACA ATTATATGAT CCTGAAAAGT TAATGTTCTT ACCGGACCGT TTTGTTAAAG GCACCTGCCC AAAATGTAAG TCTGAAGATC AATACGGCGA TAACTGTGAC AACTGTGGTG CAACTTATAG TACGACCGAT TTGATAAACC CTAAATCGGC AGTCTCTGGT GCGACACCAA TAATGAAAGA TACCGAACAC TTCTTTTTTG ACTTGCCAGC ATTTGAAGGC ATGTTAAAAG AGTGGATCCA ATCAGGCTCT TTACAACAAG AAATGGCCAA CAAGCTTAAC GAATGGTTTG AGCAAGGGCT AAAACAATGG GACATCTCAC GTGATGCACC CTACTTTGGT TTTGAAATCC CTGATGCTCC CGGTAAATTT TTCTATGTTT GGTTAGATGC GCCTATTGGT TATATGGGTT CATTTAAAAA CCTATGTGAC AAGCGTGATG ATTTAAACTT TGACGATTTT TGGAGCCTAG ACTCAACCGC AGAGGTTTAT CACTTCATCG GTAAAGACAT TGTTTATTTC CACAGTTTAT TCTGGCCAGC AATGCTTGAA GGCGCAGGTA TTCGTAAACC GACTAGTGTT TATGCTCACG GCTATGTCAC CGTAAACGGT TCAAAAATGT CTAAGTCTAA AGGCACGTTT ATTAAAGCGC GTACCTATTT AGATAATTTA GATCCGGAAT ACCTACGTTA TTATTACGCA GCTAAATTAA ACAGTCGTAT TGATGATTTA GATTTAAATT TAGAAGATTT TGCTCAACGA GTTAACTCAG ACTTGGTCGG TAAACTGGTA AACCTTGCAT CGCGAACTGC TGGCTTTATC AGCAAACGCT TTGACGGCAA ATTAGCCAAG GTAACAGACA GCAGCTTAAC CGACATATTC TTAGCTAAAA GCGAAGTGAT TGCCGAATTA TATGAAACTC GCGAATTTGG CAAAGCGATG CGTGAAATTA TGGCATTAGC TGATATTGCC AACGCCTATG TTGCCGACGC AGCACCTTGG CAACTGGTTA AGCAAGACGA TAAACAAGAT GAAGCACATC AGGTTTGCAG TAATGCATTA AACTTGTTCA GAATCTTGGT CACTTACCTT AAGCCTGTAT TACCTAAACT GGCCGAAAAT GTTGAAGGTT TTTTACAGTT AACCTTAACG TGGGACAATT TAGGTCAAGA TCTTGCTGGT CATGAAATCG CGACATTCAA AGCATTAATG CAGCGTATCG AACCTAAGAG CATTGAAGCT ATCATCGATG CCTCTAAAGA GAACTTGCAA GCGACTAATA CGGATGCACC TAAAACCGAA GCGCCGACAC AAGCTGTTAA TCAATTAGAA CTCGATCCAA TTAGCCCTGA AATAAGCTTT GAAGATTTTG CTAAAATTGA TTTACGTATT GCTCGAATCA GCAAAGCGGA ACATATTGAA AAAGCCAATA AATTACTGCG TCTTGAATTA GACTTAGGCG GCGATACCAA ACAAGTATTT GCGGGTATTA AATCAGCTTA TGCGCCTGAA GATTTGGTTG GTAAACTCAC CGTAATGGTG GCTAACCTTG CCCCACGCAC GATGAAGTTT GGTGATTCAG AAGGTATGGT ATTAGCTGCC GGTCCTGGCG GTAAAGATTT GTTTATACTA GAACCTCATG AAGGCGCACT GCCTGGCATG CGAGTTAAGT AA
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Protein sequence | MTKSQRKILV TSALPYANGP IHLGHMLEYI QTDIWSRFQK LRGHECHYIC ADDAHGTPIM LKAQQMGITP EEMIAQVQKE HQQDFADFNI QFDNFHSTHS EENRILASDI YLKLRDGGYI KTKTISQLYD PEKLMFLPDR FVKGTCPKCK SEDQYGDNCD NCGATYSTTD LINPKSAVSG ATPIMKDTEH FFFDLPAFEG MLKEWIQSGS LQQEMANKLN EWFEQGLKQW DISRDAPYFG FEIPDAPGKF FYVWLDAPIG YMGSFKNLCD KRDDLNFDDF WSLDSTAEVY HFIGKDIVYF HSLFWPAMLE GAGIRKPTSV YAHGYVTVNG SKMSKSKGTF IKARTYLDNL DPEYLRYYYA AKLNSRIDDL DLNLEDFAQR VNSDLVGKLV NLASRTAGFI SKRFDGKLAK VTDSSLTDIF LAKSEVIAEL YETREFGKAM REIMALADIA NAYVADAAPW QLVKQDDKQD EAHQVCSNAL NLFRILVTYL KPVLPKLAEN VEGFLQLTLT WDNLGQDLAG HEIATFKALM QRIEPKSIEA IIDASKENLQ ATNTDAPKTE APTQAVNQLE LDPISPEISF EDFAKIDLRI ARISKAEHIE KANKLLRLEL DLGGDTKQVF AGIKSAYAPE DLVGKLTVMV ANLAPRTMKF GDSEGMVLAA GPGGKDLFIL EPHEGALPGM RVK
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