| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2245 |
|---|
| Symbol | |
|---|
| ID | 4279157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | - |
|---|
| Start bp | 2689033 |
|---|
| End bp | 2690148 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 638135042 |
|---|
| Product | ATP-binding protein, Mrp/Nbp35 family protein |
|---|
| Protein accession | YP_750929 |
|---|
| Protein GI | 114563416 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0489] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.615288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTCAATA CGCATACAAA TTATCAATTA AGTGATGAAT TATTGTCACC AGTGTTAGAT
ATTTTAGAAG CATTTGAAGA TCCTTATTTG CATAAAGGCT TAGTCAGTGC AGGATGTGTT
ACAGCATTGT CGATAGAAGG AAAACGCCTA CAATTAGGCT TAGTTTATCC CTATCCATGT
ATGACACAAT ACCGCGACAC CGTGATGGCT ATCACCAATA AATTGGCTGT ACTTGACGCC
ATTGATGAAG TGGAATGTGA AATCGATTTC CAACCACGGG TTTATTCTGC GCTGCCAGCA
ATTGCACCTA TTCCTAACGT AAAACAAGTT ATTGCTGTGG CTTCTGGTAA AGGCGGTGTG
GGTAAATCAA CCACCGCAGT AAACCTCGCA TTAGCGTTGA AAGCTGAAGG CGCCGAAGTG
GGTATTTTAG ATGCCGACAT TTATGGCCCG TCTATTCCAT TGATGTTAGG AATTCCTAAT
TTTCGTCCAC AATCGCCAGA TGGCAAGCAC ATGACGCCGG CTTTAGTGCA TGGTATTTCT
GCGCAATCTA TTGGCTTTAT GCTAAGCGGT GATGAAGCCG CGGTGTGGCG AGGCCCTATG
GCTGCGGGTG CTTTAGCACA GTTACTTAAC GAAACTCAGT GGCCTGAATT AGACTATTTA
ATTATCGATA TGCCACCTGG AACTGGTGAC ATTCAACTGA CATTATCACA AAAAGTACCG
GTTAGCGGTG CGGTGATAGT GACAACGCCG CAAGATATTG CTTTAGCTGA TGCCAAGAAA
GGCATCACCA TGTTCAACAA AGTTAACATT CCAGTGCTTG GGATTATCGA GAACATGAGT
TTTCATCTTT GTCCTGAATG TGGTCATAAA GAACACCCAT TTGGTACTCA TGGTGGTAGT
CAAATAGCGG AACGTTATAA CGTGCCATTA TTAGGATCAT TACCATTACA CATCAATATT
CGTGAATCAA TGGACAATGG TACGCCGAGC GTGATGAGCG AACCAGAAAG TGAAGTGTCA
GGGATCTATC GCGAAATTGC CCGCAAACTT GGGGCAGAAT TAGCACTTCA ACAAGTACAA
TCAACCGTAA AAATTAGCAT ATCAGAAGAC GAGTAA
|
|---|
| Protein sequence | MVNTHTNYQL SDELLSPVLD ILEAFEDPYL HKGLVSAGCV TALSIEGKRL QLGLVYPYPC
MTQYRDTVMA ITNKLAVLDA IDEVECEIDF QPRVYSALPA IAPIPNVKQV IAVASGKGGV
GKSTTAVNLA LALKAEGAEV GILDADIYGP SIPLMLGIPN FRPQSPDGKH MTPALVHGIS
AQSIGFMLSG DEAAVWRGPM AAGALAQLLN ETQWPELDYL IIDMPPGTGD IQLTLSQKVP
VSGAVIVTTP QDIALADAKK GITMFNKVNI PVLGIIENMS FHLCPECGHK EHPFGTHGGS
QIAERYNVPL LGSLPLHINI RESMDNGTPS VMSEPESEVS GIYREIARKL GAELALQQVQ
STVKISISED E
|
|---|
| |