Gene Sfri_2244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2244 
Symbol 
ID4279156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2688385 
End bp2689023 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content38% 
IMG OID638135041 
Producturidine kinase 
Protein accessionYP_750928 
Protein GI114563415 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTC AGCAGTGTGT CATTATTGGG ATTGCCGGTG CGTCGGCTTC AGGTAAAAGT 
TTAATTGCTA AAACAATTTT TGAAGAATTG TGTCGTGATT TAGGTACAAA TCAAATTGGT 
GTGATCAATG AGGATGCTTA TTATCATGAT CAAAGCCATT TGACGATGGA AGATCGTGTC 
AAAACTAATT ACGACCATCC AAAAGCGTTA GACCATCAGT TATTAGCGTC TCATTTAACT 
CAGCTTAAAC AAGGTGAGCC AGTTAGCATT CCATGTTACA GCTATACTGA GCATACTCGT 
ATTAGCGACA CGTTGACCAT GCAACCTAAA AAAGTGATTA TCTTAGAAGG CATTCTATTA 
TTAACCAATC CTAAATTACG TGATTTAATG GATGCCAGTG TGTTTATGGA TACGCCATTA 
GATATTTGCT TTTTACGTCG GTTAACTCGT GATGTTGCTG AACGTGGCAG AACAATGGAA 
TCGGTTATTT CACAATATAA GCGAACCGTA CGCCCGATGT TTTTACAGTT TATTGAACCG 
TCAAAACAAT ATGCCGATAT TATCGTTCCC CGGGGCGGTA AAAACCGTAT CGCAACTGAT 
ATTTTAAAAG CTAGAATTCA GCATTTATTG GCGAAGTAG
 
Protein sequence
MNSQQCVIIG IAGASASGKS LIAKTIFEEL CRDLGTNQIG VINEDAYYHD QSHLTMEDRV 
KTNYDHPKAL DHQLLASHLT QLKQGEPVSI PCYSYTEHTR ISDTLTMQPK KVIILEGILL 
LTNPKLRDLM DASVFMDTPL DICFLRRLTR DVAERGRTME SVISQYKRTV RPMFLQFIEP 
SKQYADIIVP RGGKNRIATD ILKARIQHLL AK