Gene Sfri_2240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2240 
Symboltmk 
ID4279152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp2685290 
End bp2685937 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content44% 
IMG OID638135037 
Productthymidylate kinase 
Protein accessionYP_750924 
Protein GI114563411 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAC AGCAAGGCAA GTTTATTGTA ATCGAAGGAT TAGAAGGCGC GGGTAAATCA 
AGCGCGATAG CCCTCGTTAA CGATATTATT AAGCAGCATA TCGGTCAGGC TCCTGTGTGT 
ACTCGTGAGC CGGGCGGGAC TCCTTTAGCA GAAAAAATGC GCGATTTAGT TAAAATTGCC 
GATGAGACAG ATCCATTATG CGATGAAGCA GAATGCTTAC TCATTTATGC AGCGCGAACA 
CAATTAATCG CCAATGTTAT TAAACCAGCG TTGTCTGTGG GTCAATGGGT ACTTGGCGAT 
AGACACAATC TGTCATCATT AGCTTATCAA GGTGGTGGCC GAGGGTTAAT GCCATTAGTG 
AAAGCGGTCA GTGATGCTTG CTTACGAGGT TTTAAACCCG ATCTCACTTT ATATTTGGAT 
ATTGATCCAA CGTTAGGCTT AAGCCGTGCA GCCAGTCGTG GCGAGCTTGA TAGAATAGAG 
CAACAAGCGA TTGATTTTTT TGAGCGAGCC AGACGAACCT ACTTACAATT AGCGCATGAA 
GATGACAGCA TTGTGGTGAT TGATGCCAGT CAATCCATGG AACAAGTGCA TAATGATATT 
GGTATACAAT TACAACGCCA TTTATCCACT CTGATGAGTG AGCAGTGA
 
Protein sequence
MSQQQGKFIV IEGLEGAGKS SAIALVNDII KQHIGQAPVC TREPGGTPLA EKMRDLVKIA 
DETDPLCDEA ECLLIYAART QLIANVIKPA LSVGQWVLGD RHNLSSLAYQ GGGRGLMPLV 
KAVSDACLRG FKPDLTLYLD IDPTLGLSRA ASRGELDRIE QQAIDFFERA RRTYLQLAHE 
DDSIVVIDAS QSMEQVHNDI GIQLQRHLST LMSEQ