| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2234 |
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| Symbol | |
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| ID | 4279146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2676641 |
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| End bp | 2679286 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135031 |
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| Product | hypothetical protein |
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| Protein accession | YP_750918 |
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| Protein GI | 114563405 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3008] Paraquat-inducible protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.788365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAA TTGAATCGCC TAAAATTGTG AAGAAAAAGT TATTCTCGCC AATATGGTTA
TTACCGGTTG TTGCTTTGAT ATTAGGTGCC TGGTTAGGGG TCAAAAGCAT CAAAGAATCC
GGCATTGAAA TATTAATTCA TTTTCCTAGC GCTACAGGTA TTGATATCGG TAAAACGCTG
GTGAAATACC AAGGGCTGAC TGTTGGTAAA GTCACTGATA TTGGTATAGA CGATGATCTT
AAAGGGGTTA ACGTTAAAGT TATTATGGAT TACCGTGCCG ACCCATTTCT CAATAAAAAC
ACCCTGTTCT GGTTAGTAAA ACCTAAAGCC AGCATTACCG GTGTTGAAGG ACTCGATACA
TTATTTTCAG GTAATTATAT TGCCCTTCAA CCTGGTGATG GCCGCTCGGC GACCGTATTT
GAAGCACAAC GTGAAGCGCC TGCGATACTC CCCGGCAGTG AAGGGCTAAT GATCGAACTA
AAATCCCCTA AACTGGGATC AATTGATGTT GGCTCACCGG TCTTTTACCG TCAAGCACCT
GTCGGAAGCA TTGTGAGTTA TCGCCTCGAC GGAAATAAAC AAATTATTAT CAGCGCATTT
GTTCAAGAAC AATATGCCCA TTTAGTCAAT AAAGACTCCC ATTTTTGGAA TGTGTCTGGC
TTAAAAATTG ATGCATCTTT AGCGGGGATA AAAGTCAGCA CTGAAAGTAT CGCGTCTATT
TTGGCTGGCG GTATCAGCTT TGATACCGGC AGCTACACTG AAAAAGCCCA AAATGGTGAT
ATTTACAACC TTTATGAAGA TGAGCTCACC GCAATTGGAG GCGTTCAGTT TAGTTTAACC
GCATCTAGCA GTGAAGATGT TAATGAAGGC ACCGCTATCA CCTACCGCGG TATTGTTATC
GGTGAGATTG AAAAAGTCAC CTTAACTGAT GCAGGGGTGC AGTTTATCGC TCGAGTAGAG
CATCATTACA AAGCATTAAT TACCAGTGAT AGCCAATTTT GGATAAGTGG GGCTGAGTTA
TCATTAAAAG GTGTCAAAAA CGTCAGTAGA CTGGTTACAG GAAGTGTTAT TAATGTCTTA
CCTGGCACTC AAGTAACTGA AGAGCCGATG CAATTTGAAT TGGCATCACA TGCTCCTGAT
TTACTCAGTC AAGACAAACT GAAATTGACT GTAGTTGCCA CTACCCACTC TGGTGTCAGC
AATGGTGCGC AAGTGCGATA TAAGCAATTG CCAATCGGAC AGATAACCAG TATTGGTTTA
AGTAAAGACT TTTCAACTGT TGAATATAGT ATCGAAATTC AACCAGAATT TAAAAGTTTG
CTAACTAAAG GTAGTTTCTT TGTTCCTGAA AGTGCCATAG CCATTAATGC TTCACTAGAG
GGCGTTAATG TTAAAACTCG CGACCTCACT ACGATGTTGG AAGGCGCTAT TAGCTTAATT
CCGGGTAACA GCGAAATGCT GCTTTCGGCT AATAGTACTT TAACACTGCA CGAATCAGTT
GAATCGGCCC AAACGCTTTA CGCTCAACAA CAGCTTACCC CCTTTACCTT AACCAGTATT
GATGGTGCGG ACTTAGCTGA AGGATCGCCA ATTTATTACA AAAAAATGCA AATAGGCTCA
GTGAATAAAG TCAATTGGTT AGCGAAAACA GACAAATTTA ATATCGATAT CAATATAGAC
AATAAATTTG TTCCGTTAAT TAAGCCGACT ACGGTTTTTT GGCGTAATGA TGCAGTAGCC
ATCAATGCCA GTTTAGCCGG TGTCGATATC AATGTTGCTC CATTAAAAGG TGCAATAAAT
GGTAGCATTA CTCTTGGTCA TATTGACGAC AAAGTTGATA CTGCAAATAA TCAACCTAAT
CTACGATTAT ATGATACAAA GTCTCTCGCA CTCATGCAGG CTAAGGTCAT TAACCTCACT
CTGCCTGTGA GTACAAAAGT GGCAGAAAAA GCCGCTATTC GTTATCAAGG TCATAAAATT
GGTGAAGTGT CACAGGTTAA GCTAAACCAA GATTTAACCA CTCTTAATGC ACAAGCGTAT
ATTTATGGTC ATTACGCAAA CCATTTTAGT GCTAGCGATA CGGAATACTT CATCGTCGAT
GCCCAAATTT CTTTAGCGGG TATTAATGCC CCCGAAACAC TGTTAACGGG TCCTTATATT
GGAGTTATTC CAGGTAACAG CACAGAGATT ATCGATAATT TTGTTGCCCA ACCTCACTCG
AGCTTTGAGG CTACCGTACC TAAAGATGCG TTAGCATTCC AATTAGTCGA TGACCAGCTA
GGTTCAATTA AGGTCGGTAC ACCCTTGTTT TTCCGTGGAA TTAAAGTCGG ACAAATTGAT
GGGTATAGGT TGGATGACTC AGGTACAGAA ATTACGTTGT TTGCCCATGT TAATGCTGAA
TATGGTCACT TAATTAACCA GACTAGCCAG TTTTGGGATG CATCTGGTAT TAAGTTAGAC
GTTGGTTTAT TTTCTGGTGC ACAGTTAGAA ACTGGCTCAT TAGAAACAAT ACTCGCCGGT
GGTATTGCAT TTGCAACCCA AGATACCACA TCAGACAGTA ACCGTATCAA CACCACCGAC
CGTTTCCCAT TGCATGAGAA CATGCAGGAA GAATGGTCAC AATGGCGACC TACCCAAGCT
AAGTAA
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| Protein sequence | MTQIESPKIV KKKLFSPIWL LPVVALILGA WLGVKSIKES GIEILIHFPS ATGIDIGKTL
VKYQGLTVGK VTDIGIDDDL KGVNVKVIMD YRADPFLNKN TLFWLVKPKA SITGVEGLDT
LFSGNYIALQ PGDGRSATVF EAQREAPAIL PGSEGLMIEL KSPKLGSIDV GSPVFYRQAP
VGSIVSYRLD GNKQIIISAF VQEQYAHLVN KDSHFWNVSG LKIDASLAGI KVSTESIASI
LAGGISFDTG SYTEKAQNGD IYNLYEDELT AIGGVQFSLT ASSSEDVNEG TAITYRGIVI
GEIEKVTLTD AGVQFIARVE HHYKALITSD SQFWISGAEL SLKGVKNVSR LVTGSVINVL
PGTQVTEEPM QFELASHAPD LLSQDKLKLT VVATTHSGVS NGAQVRYKQL PIGQITSIGL
SKDFSTVEYS IEIQPEFKSL LTKGSFFVPE SAIAINASLE GVNVKTRDLT TMLEGAISLI
PGNSEMLLSA NSTLTLHESV ESAQTLYAQQ QLTPFTLTSI DGADLAEGSP IYYKKMQIGS
VNKVNWLAKT DKFNIDINID NKFVPLIKPT TVFWRNDAVA INASLAGVDI NVAPLKGAIN
GSITLGHIDD KVDTANNQPN LRLYDTKSLA LMQAKVINLT LPVSTKVAEK AAIRYQGHKI
GEVSQVKLNQ DLTTLNAQAY IYGHYANHFS ASDTEYFIVD AQISLAGINA PETLLTGPYI
GVIPGNSTEI IDNFVAQPHS SFEATVPKDA LAFQLVDDQL GSIKVGTPLF FRGIKVGQID
GYRLDDSGTE ITLFAHVNAE YGHLINQTSQ FWDASGIKLD VGLFSGAQLE TGSLETILAG
GIAFATQDTT SDSNRINTTD RFPLHENMQE EWSQWRPTQA K
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