Gene Sfri_2233 details

Gene Information

• Locus tag: Sfri_2233
• ID: 4279145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 2675941
• End bp: 2676654
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 638135030
• Product: paraquat-inducible protein A
• Protein accession: YP_750917
• Protein GI: 114563404
• COG category: [S] Function unknown
• COG ID: [COG2995] Uncharacterized paraquat-inducible protein A

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.80452
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTAGTA CTCCAATTAC ACCATCCAAT GAACATATAG TGGACAGCAC TAAGCAAACT 
GCGAATACCG ATAACGAGGC GAAAACTGAG GTTTTGCCTC ATATTCAGGG CAAGAAAATT 
GGCTTATGTT TATGCCCTGT TTGTCGCAAA CTGAATGTCA CCAGCAACAG TCATTGTCGA 
CGTTGTTTTA GTCAATTGAG TAGCCGTAAT TATGCCAGTA TCCAGCAAAG TTGGGCTTTA 
TTGGTGACAG CGACTATTTT ACTTGTGGTC GCCAACATCT ACCCTATTAC CTTGCTGACT 
AATCGTGGAG TGGTCACCAA TGACACCATT TTTAGTGGTA TTAGTCATTT AGTCAAAACC 
GGTATGTTCC CGATTGCTAT TATTGTTTTT ACTGCCAGTA TTTTAGTACC TTGGCTTAAA 
ATATTTGGCT TAGCGACTTA TTTAACGGCT ATCAGTTTTA ACTTACCAAT ATCAAAAAGA 
AAATTAATGG TTGGATTTCA TATCATTGAA TGGATTGGAC GTTGGTCAAT GCTCGATTTA 
TTTGTTATTT CATTAACCGT TGCCTTAGTT AATATGGGGC AATTATTAGA CGCAAAACCT 
GCACCTGCCG CGACAGCATT TGCGCTAGTT ATCTTACTAA CGCAACTCGC GGCAAAAGTG 
TTAGATACTC GATTACTTTG GGACCGCTTG GAAAACACTA ATGACACAAA TTGA 

 

Protein sequence

MPSTPITPSN EHIVDSTKQT ANTDNEAKTE VLPHIQGKKI GLCLCPVCRK LNVTSNSHCR 
RCFSQLSSRN YASIQQSWAL LVTATILLVV ANIYPITLLT NRGVVTNDTI FSGISHLVKT 
GMFPIAIIVF TASILVPWLK IFGLATYLTA ISFNLPISKR KLMVGFHIIE WIGRWSMLDL 
FVISLTVALV NMGQLLDAKP APAATAFALV ILLTQLAAKV LDTRLLWDRL ENTNDTN