Gene Sfri_2232 details

Gene Information

• Locus tag: Sfri_2232
• ID: 4279144
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 2675322
• End bp: 2675948
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638135029
• Product: paraquat-inducible protein A
• Protein accession: YP_750916
• Protein GI: 114563403
• COG category: [S] Function unknown
• COG ID: [COG2995] Uncharacterized paraquat-inducible protein A

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATGAAT TTGATGATCA TGATTCGATA ATTTTATGCC AATCATGTGA TTTGGCAGTC 
AGAAAACGTG CTTTGCCTTC TAGCGCTCGC GCGCTTTGTC CGCGTTGCCA CACGGCACTC 
TACGATTCTC CTTATTGCTC TATTAATGGC ATGCTAGCAT TATGCGTTGC TGCGTTAATT 
ATTTTTATTC CTGCTAATTT ATTGCCAGTA CTCGAAATCC ACTTCCTTGG CAGTGTACGA 
ACCACTACGG TGCTGCAAGC TGCCGTGACG GTTTGGGCCG AAGGATATTG GGTTGTAGGC 
CTAGCGGTAA TGGTTGCTGC AGTTATCGCG CCTGGGTTAT TGATTTTGTC AATTATGGCT 
CAAGTTGTAA TTGTAAAATT AAAACTGCAC AACTCATTTT GGCAAAGAAC TTATACTACA 
TTGTTAAAAA ATCATGGTTT GATATCACAA ATGACCATGT TAGAAATTTA TGTCATCAGT 
TTTCTCGTGT CGGCCTTTCA GTTATCAGAC TTTTCAGATG TGTATTTTGG TATGGGGACA 
TTCAGTTTTA CGATGTTGTT TATCATCATA TTATTTTTAC AACGTGAATA TAATCTAGAA 
CACATGTGGA GTTATGTAGA TGCCTAG 

 

Protein sequence

MHEFDDHDSI ILCQSCDLAV RKRALPSSAR ALCPRCHTAL YDSPYCSING MLALCVAALI 
IFIPANLLPV LEIHFLGSVR TTTVLQAAVT VWAEGYWVVG LAVMVAAVIA PGLLILSIMA 
QVVIVKLKLH NSFWQRTYTT LLKNHGLISQ MTMLEIYVIS FLVSAFQLSD FSDVYFGMGT 
FSFTMLFIII LFLQREYNLE HMWSYVDA