| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2227 |
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| Symbol | pepN |
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| ID | 4279139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2668653 |
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| End bp | 2671214 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638135024 |
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| Product | aminopeptidase N |
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| Protein accession | YP_750911 |
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| Protein GI | 114563398 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.396627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAG CGCAAGAAAA ACACCTAAAA GATTATACCA AGCCTGCATT CACCATTTCT
CATGTTGATT TGAACGTTAT TCTGGATGGC AAAAACACTA AAGTGACTGC CGTCAGTAAG
GTAATCCGTA ATGGTGAGCA TCAGCATGAT TTAGTGCTTG ATGGTGAGCA ACTTTCGCTA
AGTACAGTGA AACTTAATGG TGTAGCGGCT AATTATCGTC AACATGATAA CCAATTGATG
ATTAGTACGG ACCTAAATGA ATTTGAATTA GAAGTGGTTA CCTTGCTTGA CCCTGAGGCA
AATTCGAGTC TTGAAGGACT TTACATGTCA GACGGTGCTT ATTGCACTCA ATGTGAAGCT
GAAGGATTTC GCCGGATTAC TTATTTCTTA GACAGACCCG ATGTTCTCGC TATTTATACT
GTGCGTATCG AAGCGGATAA ACAAGCATTT CCATTTTTGT TAAGTAACGG TAATTTAATT
GAGAAAGGAG AAATGCCTCG TTCTGGTCGT CATTTTGTCA AATGGCATGA TCCATTCCCT
AAACCAAGTT ACTTATTTGC CTTGGTTGCT GGTGACTTTG ATTTACTTAA TGACAGTTTT
ACCACTCAAT CAGGTCGTGA AGTCAAACTG CAAGTATTTG TCGATAAAGG CAATTTACAT
AAAGCAGATC ACGCAATGGC ATCACTGAAA AAATCAATGA AATGGGATGA AACCCGTTTC
GGTCTTGAAT ATGATCTTGA TATTTATATG ATTGTTGCGG TAGATTTTTT CAATATGGGT
GCCATGGAAA ATAAAGGCTT AAATGTCTTT AATACCAAAT ACGTGCTCGC AGACAAAGCC
AGTGCAACAG ATGATGATTA TCATGGTATT GAGTCTGTCG TTGGCCATGA ATACTTTCAT
AACTGGACTG GTAACCGAGT CACATGTCGT GATTGGTTTC AGTTGAGCTT AAAAGAAGGT
TTAACGGTAT TTCGTGACCA AGAATTTAGT TCCGATGTTG GGTCTCGCGC GGTTAACCGA
ATTCATGCTA TCCGAGTGAT GAAAAACCAA CAGTTTGCTG AAGATGCTGG ACCTATGTCT
CATCCTATAC GCCCAGAAAG TGTGATTGAA ATGAACAATT TCTATACCGT GACGGTATAT
GACAAAGGTG CTGAAGTTAT CCGTATGATG CACACCATTC TTGGTGAAGA AGGTTTTCAA
GCTGGAATGA AGTGCTATTT TGAACGTCAT GACGGGCAAG CGGTAACCTG CGATGATTTT
GTAAACGCTA TGCAAGATGC TAGCGGTAAA GATTTAACCT TATTCCGTCG TTGGTATAGC
CAAGCAGGCA CACCCGTTGT AACGGTTAAA GACAGTTTTG ATGCGGATAA AGGCGAGTAT
CATTTAACGA TTACTCAACA AGTGATGTCA CAAGGTGTGA AGGGGCAAAC ACTGCATATA
CCGTTCAGTG TTGAGCTGTT AGACAGTGCA GGGCAATCAA TTGTTAATAA AGTCCTAGAT
GTGACTAAAG CCAACCAAAC TTTTGTGTTT GATGGACTAG AAAGTGCGCC TATAGCATCT
TTACTGCAAG ATTTTTCTGC ACCCGTTAAA TTGGTTTACG ATTTTAGCAT TGATCAACTT
GTACATCTTA TGCGCCATGC TTCTAGCGAA GTGGCCCGTT GGGAAGCATC AGTACAGTTA
GTGAGCCACG CCATTTGGAA TAACGTTGCA CAGTTGCAAA AGCAACAAGT CATGATGGTT
GATACTCGTG TTATTGAAGC ATTCAGAGGT GTCATTTTAG ATGCGAAAAT AGACCAAGCA
TTAGTAGCTG AAATTTTGTC TATTCCAACT GCTTCAGCAT TAATTGAGCA GGTAGATAAC
GTTGATTTAG ATGCTTTAGC CAAAGCCAGA GAGTTTGTTG TTGAAGAACT CGCATCAGCT
TGTGAAGATG AATTATTGGT ACGTTATCGT GAGCTGATAC TTCTAGATAA TGCAGGTGCG
CGTGCATTTA AAAACATTGC CTTGTCATTA TTATGCCAAG TGACCGATAC TCATGAATCA
TTAGTTGAAA AACAATATTA TTCAGCAAAA AATATGACCG ACAGTTTAGG GGCTTTGAAA
GCGGCAGCTA CAGCAAAATT AGCCTGTTTA CCTATGTTAT TGAGTGATTT TGAGTCTACG
TGGGAATCAA CGCCATTAGT GATGGATAAA TGGCTGACAT TACAAGCGTT AGTTAATAGC
GATGAAGTGA TAGAGCAAAT TAAAACGCTG ACAAAGCACA GCAGTTTTAG TTTCTCTAAC
CCTAACCGTG TACGTTCATT GATAGGGGCT TTTGCAGCTG CAAACACTTA CCAATTCCAT
CGTGCTGATG GCGAAGGCTA CCGTTATTTG ACCACAATAT TAGTCAAATT GAATAAGTCG
AATCCACAAG TTGCATCGCG AATGATCACA CCATTAATTC AGTTTGCCAA ATTTGATCAA
CATCGCCAGC AATTAATGAA ACAGTGTTTA GTAGAATTAA AAGCTTTACC GGATTTATCG
AAAGATTTAT ATGAAAAAGT CACTAAATCA TTAGCAGAAT AA
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| Protein sequence | MNQAQEKHLK DYTKPAFTIS HVDLNVILDG KNTKVTAVSK VIRNGEHQHD LVLDGEQLSL
STVKLNGVAA NYRQHDNQLM ISTDLNEFEL EVVTLLDPEA NSSLEGLYMS DGAYCTQCEA
EGFRRITYFL DRPDVLAIYT VRIEADKQAF PFLLSNGNLI EKGEMPRSGR HFVKWHDPFP
KPSYLFALVA GDFDLLNDSF TTQSGREVKL QVFVDKGNLH KADHAMASLK KSMKWDETRF
GLEYDLDIYM IVAVDFFNMG AMENKGLNVF NTKYVLADKA SATDDDYHGI ESVVGHEYFH
NWTGNRVTCR DWFQLSLKEG LTVFRDQEFS SDVGSRAVNR IHAIRVMKNQ QFAEDAGPMS
HPIRPESVIE MNNFYTVTVY DKGAEVIRMM HTILGEEGFQ AGMKCYFERH DGQAVTCDDF
VNAMQDASGK DLTLFRRWYS QAGTPVVTVK DSFDADKGEY HLTITQQVMS QGVKGQTLHI
PFSVELLDSA GQSIVNKVLD VTKANQTFVF DGLESAPIAS LLQDFSAPVK LVYDFSIDQL
VHLMRHASSE VARWEASVQL VSHAIWNNVA QLQKQQVMMV DTRVIEAFRG VILDAKIDQA
LVAEILSIPT ASALIEQVDN VDLDALAKAR EFVVEELASA CEDELLVRYR ELILLDNAGA
RAFKNIALSL LCQVTDTHES LVEKQYYSAK NMTDSLGALK AAATAKLACL PMLLSDFEST
WESTPLVMDK WLTLQALVNS DEVIEQIKTL TKHSSFSFSN PNRVRSLIGA FAAANTYQFH
RADGEGYRYL TTILVKLNKS NPQVASRMIT PLIQFAKFDQ HRQQLMKQCL VELKALPDLS
KDLYEKVTKS LAE
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