Gene Sfri_2225 details

Gene Information

• Locus tag: Sfri_2225
• ID: 4279137
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: -
• Start bp: 2665983
• End bp: 2668031
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 638135022
• Product: hypothetical protein
• Protein accession: YP_750909
• Protein GI: 114563396

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0218446
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATTG TTAAAAAAAG ATTTAACAAG TCGGCTCTCG CTTTGGGGGT GGTGTCGGCA 
TTATGTTTGG GAATGAGCAC TTCAGCCTCA GCAGTTTCTT TTGATTGGGG TGATGTACGA 
GGTACATTTG ACTCTACATG GACTGCAGGC GCGAGTTGGC GTGTATCAGA CCGTGATTGG 
AGTAACCAAA TCGGTAAGGT GAACCAACCA CAATTTGATT GGTCAGGTTA TTCTGCATTT 
GGTGGCGCGT TTGGCTCTAC CAAATATACA TCTGCAGAAA TTTGGGCTCA GCCGGGTTCA 
TATTCAAGCA ACAATGATTT AAGTAATTTG TTGTATGCGC AAGGTGATAC TACGTCTGAG 
ATTGTTAAAG GTCTTCACGA GTTATCACTG AAGTACGAAA ATTACGGTAT CTTTTTACGC 
GGCATGTATT TTTACGATCG CAAATTAAAT GACGGTGATT ATGGCTTTAA CGATCCATTA 
ACCGGAAAAG AATTCGATCC TTGTGAAGAT AACAAAGCAT CAGAAGTGCA ATGTAAAGAC 
ATTCGCTTAT TAGATGCATT TGTTTACGGT AACTGGGACT TAAATGACGG TGCTAACCCA 
TTAAGTGTTC GTGTGGGTAA CCAAGTAGTT TCATGGGGCG AAAGCACCCT GATCTCTCAC 
GGTATTGCTG AAATCAATGC TGTAGATTTA AATATTCTTA ATGCACCAGG TGCGGAGCTT 
AAAGAAGCAT TTCGTCCGCA AGGCATGGTT TGGGCATCGT TAGGGTTAAC TGAAAACCTA 
AACCTTGAAG CATTTTATCA ATATGATTGG CAACCGATTT GGATCCCTAC ACCGGGTTCT 
AACTTTGCAA CCAATGATTT TGCTGGGTAT GGTGGTTACA ACCAAAATGC ACAATTAGGT 
TTCAACTCAA ATCCGGATAT CAACCAAGAC TTCCTAATTT CAGAATACAC ACGTTTATAT 
GAAGCTGCAG CTGCTACTGG GTTTAACCCG GCATATGCCG CTTACATGAC TGCTTATTCA 
ACTAAGGTTG CTTTAGTTCA AGATGCTGCA GATCCTAGTG ACGATGGCCA GTTTGGTGTT 
AAATTAGGCT ATTACTCACC AGAACTAGGC GAAACAGAGT TCGGTCTTTA TTACATGAAT 
TACCATAGCC GTCGCCCAAT CATCAGTGGT ACTGCCTCTA ACTTTAACGC AGATGCTATA 
GGTCGTGATT ATGGACGTTT GGCGCAAAGT GGTGGCGTTA TAGACCGTGA ACTGTTGTTA 
AGCATGGAAA CCTTCACCAA GTCGCAAATC GTATACCCTG AAGATATTCA GTTATATGGT 
TTTAGCTTTA ACACATTAGT GGGTGACACA TCTGTTGCTG GTGAAATTTC ACACCGTGTT 
GATGAGCCAT TGCAAATTGA TGACGTTGAA TTACTTTTCT TAGCGATGCC TCAACAGCTT 
GCAAATGCAG GACTTCGTCC TGATTTAGAT GGTATTTCAC AAATGGATAA TGTGGAACCT 
GGCTCAAACG CTGAGGGGTA TATACTTACC GATACGACTC AAGCACAGGT AACCTTTACT 
CATTTATTCG GTCCAACACT TGGTTTAGAT AACTTAACCA TGCTTGCTGA AGTGGGTGGT 
GTGTGGATCC ATGATATGCC TGGTTTTGAC GAATTACGTC TAAACGGTCC AGGAACCGCT 
CGTTCTGGCG GTAACCCAGA AATGACGGGT ATTATTGCCG CTCTGCACAA TGGTCCAGAA 
ACCAATCCAT TCCCAACAGA TTTTGCGTGG GGTTATCGTT TAGTGGCTAA AGCTGACTTT 
AACAACGTGT TTGCTGGTGT GAACATGTAC CCAAGAGTGA TTTTCTCTCA CGACGTTGAT 
GGTATTACAC CGGATCCAAT GTTCTTATTC ACCGAAGGCA GAAAATCTGT GGCTTTAGGT 
GTGAACTTTG ATTATCAAAG TCGCTGGGGC GCAGACATTT CTTACAACAG CTTCTTTGGT 
GGCGTAGGAA CAACAAATGC GATGACAGAC AGAGATTACA TCTCTTTCAA CGTCAAGTAT 
TCGATTTAG 

 

Protein sequence

MNIVKKRFNK SALALGVVSA LCLGMSTSAS AVSFDWGDVR GTFDSTWTAG ASWRVSDRDW 
SNQIGKVNQP QFDWSGYSAF GGAFGSTKYT SAEIWAQPGS YSSNNDLSNL LYAQGDTTSE 
IVKGLHELSL KYENYGIFLR GMYFYDRKLN DGDYGFNDPL TGKEFDPCED NKASEVQCKD 
IRLLDAFVYG NWDLNDGANP LSVRVGNQVV SWGESTLISH GIAEINAVDL NILNAPGAEL 
KEAFRPQGMV WASLGLTENL NLEAFYQYDW QPIWIPTPGS NFATNDFAGY GGYNQNAQLG 
FNSNPDINQD FLISEYTRLY EAAAATGFNP AYAAYMTAYS TKVALVQDAA DPSDDGQFGV 
KLGYYSPELG ETEFGLYYMN YHSRRPIISG TASNFNADAI GRDYGRLAQS GGVIDRELLL 
SMETFTKSQI VYPEDIQLYG FSFNTLVGDT SVAGEISHRV DEPLQIDDVE LLFLAMPQQL 
ANAGLRPDLD GISQMDNVEP GSNAEGYILT DTTQAQVTFT HLFGPTLGLD NLTMLAEVGG 
VWIHDMPGFD ELRLNGPGTA RSGGNPEMTG IIAALHNGPE TNPFPTDFAW GYRLVAKADF 
NNVFAGVNMY PRVIFSHDVD GITPDPMFLF TEGRKSVALG VNFDYQSRWG ADISYNSFFG 
GVGTTNAMTD RDYISFNVKY SI