| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2221 |
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| Symbol | |
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| ID | 4279133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 2656004 |
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| End bp | 2660851 |
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| Gene Length | 4848 bp |
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| Protein Length | 1615 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638135018 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_750905 |
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| Protein GI | 114563392 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.988554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTTGA AAGATGCAAT GCCTTCAGTA CTACTGGAAA ATGTAGTCAA TTTAATTCAC
ACAAAAATCC CTAATTCTCA AGCCAAACAA GTTGAGCAAT TTGCTAATTG CCTCTATGCC
CATATGTCAA AAGACGATCT CAATGCTCGT AATGACAGTG ATTTATATGG TGCTGTAGTG
AGCCTTTGGA ATGCGCTGAA TAAAACGGCC CAGGATCAAA CCCACATCCG TGTATTTAAT
CCAAGCCAAG CAAAACATGG CTGGCAGTCA ACTCACAGCA TTATTGAGGT TATCCAACTT
GATATGCCTT TCTTGGTTGA CTCGCTCTCA ATGGCGTTAA ATCGAATGGG TATCACTGCC
CATGTGATGT TGCACACGCC ATTAGCCGTA GTACGCGGTA ATAACAACAA TGTATCTGAT
GTGTCATTTG TTAATGACAC ATCAGATAGC AGCAATAATG TTGCTGTATT TTTAGTCGAA
ATTGACAAAC AAAATAGTGA TGCTGACATT AAGGCGATTG AAAAAGAAAT TCAATCTGTT
CTTGCTGATG TCTCTGCGTC GGTCAATGAT TGGCAATTAA TGTCAGATAC ATTAACCGAT
ACTATTAAAC AATTACCTTC ACGTCCTTTC CCGGGTGATA AAACGGAACT GAAAGAGTCA
GTTGATTTCT TAAACTACTT GAACAACCAT CATTTCACTT TGCTTGGCTA TCGTTATTAT
GATCTAAAAC GTGTTGAAGG TGATGTTGAG CTTGTTCCTA ACATTGAATC TAGCTTAGGG
CTAATGAACC GTTCAAAAAC CTCCCATAGT GAGCGTGGTT TATTACTTTC AAGTTTATCT
GATTCAGCCC GTAAAGAGGC GTTAGATGAA AGCTTACTCG TTCTCACCAA AAGCTCTGCT
AAAAGCCGTG TACATCGTCC AGCTTATGTA GATTATATTG GTGTTAAACG TTTTGACAAA
AAAGGCAACG TAATTGGTGA AGATCGTTTC ATTGGTTTAT ATGCTTCTAA TCTTTATAAC
CGTAGTCCAC GCGAAATCCC ATTATTGGGT GAAAAGGTTC AGCGCATTCT TGATAACTCA
GGGCTAGCGC CGCGCTCTCA TGATTATAAA GCGTTAATGA ATATTCTTGA GAACTTACCT
CGTGATGAGC TAATTCAAGC TAAAGATCCT GAGCTATCAA ACATCGCTCA CGGTGTTTTA
GAAATGCAAG ATCGCGACAA GTTAAAGTTA TTTGTGCGTA AAGACGGTTA TGGCCGTTTC
TTGTCGTGTT TAGTTTATGT GTCTAAAGAC CGCTACAACA CTAAATTACG TCAAGATACT
CAACGCATTC TGGCACAACA TTTTAAAAGT ACAGAAGATG TTGAGTTCAC CACGTACTTC
TCAGAGTCTA CATTGGCTCG AACTCACTAT ATTATCAAAG TTGATAATAA CAATATGGAT
GTTGATGTGG CCGCCATTGA AAGAAATCTT ATCGAAGCTG CTCGCTCATG GGACGACAAA
CTGCACACCG CATTAAACAA TGCCGTTGGT GAGCAAGCTG GAACGGGACT GACAAAACGT
TATTTAAATG CTTTCCCACC TAGTTATAAA GATGATGTGC TTCCAAGTTC AGCTGTTGTT
GACATGCAGC ACCTTGAAGC ATTGGATGAC GAACACAAAT TAGGTATGTT GTTTTATCAA
CCGCAAGAAA CTGCATTGAA TGACAATAAA GTCCGCCTGA AACTGTTCCA TAAAGACGAG
CCTATTCACT TGTCTGACGT ACTTCCAATG CTTGAAAACT TTGGTTTACG TGTGATTAAT
GAACGTCCAT ACGAAGTCAA AACTAATGAT GGTGCGACAT TCTGGATTTT AGACTTCTTA
ATGACAGTGC AGGGTGCAGC GACAGAAAAC TTAGCTGATA GCCAAGACCG TTTCCAAACG
GCTTTATTGC AAGTGTGGCA GAAGAAGTTA GAAGACGACG GCTTTAACCG TATGGTACTG
TCAACAGGCC TCAGTGGTCG TGAAGTGTCT ATTTTGCGTG CTTATGCTAA GTACATGCGT
CAAATTGATG CAACATTCAG TCAGTCGTAC ATCGAAGAAA CGTTTAGCCG TTATCCTAAA
TTAGCGGACT TATTGGTGAA AATGTTCATC CGTAAGTTTA ACCCTAAACT AAAAACGCGC
ACCTTAAGTA AGTTCCTTGA ACAGGTGAAC ATACAACTTG ATGACGTTTC AAGCTTAGAT
GATGACCGTA TTATTCGTCG TTACTTGGAT TTAATTAACG CCACATTACG AACTAACTTC
TATCAAACTG CCATTGGCGG AAAAGCGAAA GACTATATCT CGTTTAAGTT TGCACCGGGC
TTAATTCCTG AAATGCCTAA GCCGTTACCG AAGTTTGAAA TATTCGTGTA TTCGCCTCGT
GTTGAAGGTG TGCATTTACG TGGCGGTAAA GTGGCTCGCG GTGGTTTACG TTGGTCAGAT
CGTCGTGAAG ACTTCCGTAC CGAAGTATTA GGCTTAGTAA AAGCACAGCA AGTTAAAAAC
ACCGTGATTG TGCCTGTGGG CGCAAAAGGT GGTTTTGTGT GTAAACAACT GCCGACAGAA
GGTGGCCGCG AGGCATTATT TACGGAAGGA CAAGAATGTT ACCGTATCTT CATTCGTGCG
TTATTAGATA TTTCGGACAA CATTGTTAAT GGTGAAGTGG TTCCACCCGT AGATGTTGTA
CGTCATGATG AAGACGATCC ATATTTGGTC GTTGCAGCTG ATAAAGGCAC GGCAACATTC
TCAGACATTG CTAACGCTAT TGCGATTGAA TACAACTTCT GGTTAGGCGA TGCATTTGCC
TCTGGTGGTA GTAACGGCTA TGACCATAAA AAAATGGGCA TTACTGCCCG TGGTGCGTGG
GAGTCTGTTA AACGTCATTT CCGCGAAATT GGTGTTGATT GTCAAACCAC TCCATTTAGT
TGTGTGGCTA TTGGTGACAT GGCTGGTGAC GTATTTGGTA ACGGTATGCT GCTATCTGAG
CAAACTCAAT TGGTTGCTGC ATTTAACCAT ATGCACATCT TTATTGACCC TACGCCAAAA
ATTGCCGAAA GCTATGCTGA GCGTCAGCGT TTATTTGTAC TACCACGCTC AAGCTGGGAA
GACTATAACG CCAAACTGAT TTCTAAAGGC GGCGGGATAT TCTTACGTTC TGCTAAGTCA
ATTAAATTGA CTCCAGAAAT CAAGCAGATG CTAGACACTG ACAAAGACAC CATGAACCCA
ACTGAACTGA TGAAAGAACT ACTGAAAATG CCAGTAGACT TGATTTGGAA TGGTGGTATT
GGTACCTACG TTAAGTCGAG CAAAGAATCG CATGCTGAAG TAGGTGACCG TGCAAACGAT
ACCTTACGTG TAAATGGTAA AGAAGTACGT GCCAAAATCA TTGGTGAAGG CGGTAACTTA
GGTTGTACAC AATTAGGCCG TATTGAATAC TGTGCTAATG GTGGCCGTAT GAATACTGAC
TTCGTCGATA ACGTTGGCGG TGTTGATTGT TCAGACAACG AAGTTAACAT CAAAATCTTC
TTAAACACGT TAGTGGCAGA AGGTGAGTTA ACGGTTAAAC AGCGTAACCG TTTACTTGAA
GATATGACTG ACGAAGTCAG CGATATTGTG ATTAAAGATT GTAAAGACCA AACCCGTACT
ATTTCGGTTA CCCAAGTACA CGGTGTGTCA CAACTTAAAG AGCAAATTCG TTTTATTCAG
TATCTTGAAA AAGACGGTAA ACTTGACCGC GCACTTGAGT TCTTGCCAAC TGATGACGAT
TTAGCAGAAC GTTTAGCCAA CGGCCGTGCG TTAACGCGTC CAGAGTTATC GGTACTTGTT
GCTTACGCTA AAATGGTGCT TAAAGAGCAA CTAGTGACAC CTGAAATCAC TGAAGATGCA
TTTTTAAGCA AGCTATTAGT GGCTTATTTC CCTAAAAAGT TACAAGCAAA ATACGCTGAC
AAAATGATCG CACATCCTCT ACGTGGTGAA ATTATTGCTA CCTCATTAGC CAATGAATTG
GTGAATGATA TGGGCTTTAA TTTTGTACAA CGTATGCAAG ATGAGACCGG TGCAACAGTT
GCCGAAGCGG CTATTTGTTA CACTATGGCC CGAGAAATCT TTGGTCTTGA TGAGTTAACC
GCTTCTATTA CTGACTTAAA CGGTGTTACT CCGGCACATG TGCAGGGTGA AATGCTACAT
CAGTTGCGTC GTAATATGCG TCGAGCATGT CGTTGGTTTA TTCGTCATCG CAATCGTGCT
CATGATATTG ATCAAACAGT GGCATTCTTT AAGCCTGTAT TTGAACAGCT TAAAGCCAAT
GTTGACCAGT ATATGATTGC TGCTGAAGTG AAAGTGATTT CTGCTGAAAT TACTGCACTA
ACGAAAGAGA ATGTCCCTAA AGCAGTTGCA CAAGTTGTCG CTAAAATGAG TACATTATTC
TCTGCGTTAG ACATTGCACA AATTGCTCAA ATCGAGAATA AGTCAGTTGA GCTGGTATCA
GAAACTTACT TCAAACTCGG TGCTAAAGTT GAATTACATT GGTTCTTAGA ACAAATCAGT
GCTCAACCTG TAGCTAACCA TTGGCAAGCA CTTGCTCGTG CTGCATTCAG AGAAGAACTT
GATTGGCAAC AACGTGCATT AAGTTCTGCA GTATTACGTA CTTGTACAGA TACTTGCGAT
GCAGATAGTG TTATCAATCA ATGGATTACA TTAAATAAAC CATTGCTTGA AAGATGGTAT
CACATGTTAG CGGACTTCAA GGTTTCTCAA ACCCATGAAT TTGCTAAGTT CTCAGTCGCC
TTAAGAGAAC TGAACTTGCT GATTTTGCAT TGCGAAGGTC AGAAGTAG
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| Protein sequence | MALKDAMPSV LLENVVNLIH TKIPNSQAKQ VEQFANCLYA HMSKDDLNAR NDSDLYGAVV
SLWNALNKTA QDQTHIRVFN PSQAKHGWQS THSIIEVIQL DMPFLVDSLS MALNRMGITA
HVMLHTPLAV VRGNNNNVSD VSFVNDTSDS SNNVAVFLVE IDKQNSDADI KAIEKEIQSV
LADVSASVND WQLMSDTLTD TIKQLPSRPF PGDKTELKES VDFLNYLNNH HFTLLGYRYY
DLKRVEGDVE LVPNIESSLG LMNRSKTSHS ERGLLLSSLS DSARKEALDE SLLVLTKSSA
KSRVHRPAYV DYIGVKRFDK KGNVIGEDRF IGLYASNLYN RSPREIPLLG EKVQRILDNS
GLAPRSHDYK ALMNILENLP RDELIQAKDP ELSNIAHGVL EMQDRDKLKL FVRKDGYGRF
LSCLVYVSKD RYNTKLRQDT QRILAQHFKS TEDVEFTTYF SESTLARTHY IIKVDNNNMD
VDVAAIERNL IEAARSWDDK LHTALNNAVG EQAGTGLTKR YLNAFPPSYK DDVLPSSAVV
DMQHLEALDD EHKLGMLFYQ PQETALNDNK VRLKLFHKDE PIHLSDVLPM LENFGLRVIN
ERPYEVKTND GATFWILDFL MTVQGAATEN LADSQDRFQT ALLQVWQKKL EDDGFNRMVL
STGLSGREVS ILRAYAKYMR QIDATFSQSY IEETFSRYPK LADLLVKMFI RKFNPKLKTR
TLSKFLEQVN IQLDDVSSLD DDRIIRRYLD LINATLRTNF YQTAIGGKAK DYISFKFAPG
LIPEMPKPLP KFEIFVYSPR VEGVHLRGGK VARGGLRWSD RREDFRTEVL GLVKAQQVKN
TVIVPVGAKG GFVCKQLPTE GGREALFTEG QECYRIFIRA LLDISDNIVN GEVVPPVDVV
RHDEDDPYLV VAADKGTATF SDIANAIAIE YNFWLGDAFA SGGSNGYDHK KMGITARGAW
ESVKRHFREI GVDCQTTPFS CVAIGDMAGD VFGNGMLLSE QTQLVAAFNH MHIFIDPTPK
IAESYAERQR LFVLPRSSWE DYNAKLISKG GGIFLRSAKS IKLTPEIKQM LDTDKDTMNP
TELMKELLKM PVDLIWNGGI GTYVKSSKES HAEVGDRAND TLRVNGKEVR AKIIGEGGNL
GCTQLGRIEY CANGGRMNTD FVDNVGGVDC SDNEVNIKIF LNTLVAEGEL TVKQRNRLLE
DMTDEVSDIV IKDCKDQTRT ISVTQVHGVS QLKEQIRFIQ YLEKDGKLDR ALEFLPTDDD
LAERLANGRA LTRPELSVLV AYAKMVLKEQ LVTPEITEDA FLSKLLVAYF PKKLQAKYAD
KMIAHPLRGE IIATSLANEL VNDMGFNFVQ RMQDETGATV AEAAICYTMA REIFGLDELT
ASITDLNGVT PAHVQGEMLH QLRRNMRRAC RWFIRHRNRA HDIDQTVAFF KPVFEQLKAN
VDQYMIAAEV KVISAEITAL TKENVPKAVA QVVAKMSTLF SALDIAQIAQ IENKSVELVS
ETYFKLGAKV ELHWFLEQIS AQPVANHWQA LARAAFREEL DWQQRALSSA VLRTCTDTCD
ADSVINQWIT LNKPLLERWY HMLADFKVSQ THEFAKFSVA LRELNLLILH CEGQK
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