Gene Sfri_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2217 
Symbol 
ID4279129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2652595 
End bp2653302 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content41% 
IMG OID638135014 
Productphosphoglycerate mutase 
Protein accessionYP_750901 
Protein GI114563388 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATA TCTATTTAAT CCGTCATGGG CAAGCCAGCT TTGGCGCTAA TAACTATGAC 
AACTTATCAA GTTTAGGCCA TAGTCAAGCA AGGCATTTAG GTGAGTATTT TAACCTGCGC
TTAATTCAAC CTAGCCATGT TATTTGCGGC AACATGACTC GACATCAACA AACACGAGAT
GCCTGTTTAT CGACGTTGTC ACCGCCTTTA TTGCATGAGT CATTACAGAT AAGTCCCCCT
TGGAATGAGT TTGATCATGA AAATGTGATT GCGGTTTATC GACCAGACTT GGCAACCCCA
GATGCAATGA AGTACTACCT CCAACAACAA GCTTCACCCA CAAGAGCCTT TATCGAATTA
TTTAGTCAAG CCATTCAACA ATGGCAACAA CAATCAAATT CCGCCAACGA TCACTATAGT
GAATCTTGGC AACACTTTAC TCAACGAGTC AACCAAGGGT TACAGCAACT CATCGAGCAG
ACAAATGACA ATGACACTGT GTTTGTATTC ACCTCTGGTG GCGTCATTAG TGCCGCGATG
ATGCAAATAT TAACAGTGCC AGAAGGTCAG TTTTTTAATA TCAATAAACA GCTAGTTAAT
TGCGGCGTGA CCCAGTTACA GTTGAAACGG CAACGATTGA GTTTAATCAC CTTAAATGAG
CATAGCTTTT TTGATGGGTC ACAACGCCAT TTACACAGCT TAATTTAA
 
Protein sequence
MANIYLIRHG QASFGANNYD NLSSLGHSQA RHLGEYFNLR LIQPSHVICG NMTRHQQTRD 
ACLSTLSPPL LHESLQISPP WNEFDHENVI AVYRPDLATP DAMKYYLQQQ ASPTRAFIEL
FSQAIQQWQQ QSNSANDHYS ESWQHFTQRV NQGLQQLIEQ TNDNDTVFVF TSGGVISAAM
MQILTVPEGQ FFNINKQLVN CGVTQLQLKR QRLSLITLNE HSFFDGSQRH LHSLI