Gene Sfri_2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2216 
Symbol 
ID4279128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2651525 
End bp2652592 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content43% 
IMG OID638135013 
Productaminoglycoside phosphotransferase 
Protein accessionYP_750900 
Protein GI114563387 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAAC AATATCTGGA TAAAGCCAAA GCGGTTCGTA CCGGCGAGGA GCTTGATGCT 
GCGATAATTG ACCCGTGGTT AAAACAACAT ATCGACGGAC TTGAGGGAGA CGTAACCATA
ACCCAGTACA CTGGCGGTGC ATCCAATTGG ACTTACTGCT TAAGTTACGC CAATCGCAAG
CTTATTTTAC GCCGCGCGCC CAAAGGCACT AAAGCTAAAG GTGCTCACGA CATGGGGCGC
GAGTATCGAT TACAACAAGC ACTTAAACCT GTTTACCCTT ATGTACCAGC AATGCTGGCA
CATTGTGATG ATGAAAATGT ATTAGGGACT GAGTTTTATG TCATGGAAAA GCTCAATGGC
ATTATCCCAA GACAAAACCT CCCTAAAGGC TTAAAAGTCG ATAAGACGCA AGCCAGAACG
CTTTGCACTA ATGTAATTGA TTGTTTAATC GAATTACATA AAGTGGATGT AGATGCCGCT
AATCTTAACC ATATCGGCAA AGGCGAAGGA TATACGCAGC GCCAGATTGA TGGCTGGAGC
AAACGCTACA CTCAAGCTAA AACCTGGAAT GTGCCCTCTG GCAAAAAAGT GATGGCTTGG
CTACAACAAC ATAAACCAGC ACAAGAAAGC ATTTGCCTAA CCCACAATGA CTTTCGGTTT
GATAACGTAG TGTTAGATCC AAATGACATC AGTAAGGTCA ATGGAATACT CGACTGGGAA
CTGGCGACGC TGGGGAACCC ATTAATGGAT TTGGGTAATA CCCTCGCCTA TTGGGTTGAA
GCAGATGATG ACTTTTTAGC ACAAATGACT CGCCGCCAAC CCACACACCT TGATGGTATG
CTCACTCGAC AACAAGTTGT TGAATATTAT TGCGATAAAA TGAATATCAC CATTGATGAT
TTTCGTTTTT ATGAGGTGTT CGGTTTATTC CGTTTAGCAG GCATAGTGCA GCAAATTTAT
TATCGCTATC ACCATAAACA AACACGCAAC CCTGCATTCA AACAATTTTG GATTTTTTCA
CATTATTTAT TGTGGCGTTG TCAACAAACA ATGAAGCAAA AAGGATAA
 
Protein sequence
MNQQYLDKAK AVRTGEELDA AIIDPWLKQH IDGLEGDVTI TQYTGGASNW TYCLSYANRK 
LILRRAPKGT KAKGAHDMGR EYRLQQALKP VYPYVPAMLA HCDDENVLGT EFYVMEKLNG
IIPRQNLPKG LKVDKTQART LCTNVIDCLI ELHKVDVDAA NLNHIGKGEG YTQRQIDGWS
KRYTQAKTWN VPSGKKVMAW LQQHKPAQES ICLTHNDFRF DNVVLDPNDI SKVNGILDWE
LATLGNPLMD LGNTLAYWVE ADDDFLAQMT RRQPTHLDGM LTRQQVVEYY CDKMNITIDD
FRFYEVFGLF RLAGIVQQIY YRYHHKQTRN PAFKQFWIFS HYLLWRCQQT MKQKG