Gene Sfri_2203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_2203 
Symbol 
ID4279115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp2636489 
End bp2637826 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content42% 
IMG OID638135000 
Producthypothetical protein 
Protein accessionYP_750887 
Protein GI114563374 
COG category 
COG ID 
TIGRFAM ID[TIGR03503] conserved hypothetical protein TIGR03503 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000181796 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCTA CTCGCGCCGG TTATCTTGCT ATTCTTTGTT TATTGTTGCT GAGTCTTATC 
TTAGCGTGGC AACCTAATGC CCAGGCTGCA GTGGTCAATG CATCGCAAGC AGCAGAACTT
AAAAATCGTT TTCGAATCGA TCACATGGTC GATCATTTAA CGTTGGTTAT CCAACGAAGC
TATGGTTCCG CTCCTGTCGT GGTCATTTTA CCCGATGGCA GTAAATGGTA CTCAAATCGT
CATCCTCAAA CGGTAAAATG GGTAGACGGT ATTGCTGCTG ATATGATTTA TATCGAAAAA
CCAATGCCAG GGCCTTGGCA GTTATTGGGG AGTGTGGTTG AAGGGTCGAC AATTAAAAAA
TTATCTGCAT TAGACATTGC TGTGCAACCG TTACCGCAAC CACTTTATCA GGGTGAAAGG
TTGAAAGTAA CAGCAAGACT CTTGGGTGAT AGTTTAACCA TGAGAATGCC GGGTTTGGAG
TATATGGTCG AATGGACTGC TCGTTTTACC AGTGAGCATC TTCCTACTGA CGATAACTTT
GCAACGGGCA CCATTATTGT CGGTGCTTAT AAAGACAATG GTGAATTGTT GGACGAAGTA
CCTGATGATG GCATCTTTAC CGGAAGCCAT AATTTACAAC AACCTACCGG TCATTATGTA
CTCAACGTTA CCGCCCGAAA TAATATATTT GAACGTGAAT ATGTGATGCC GTTTGAGCTA
TCGCCACAAC CAATTACTGT CAAAATGGTG CCCAATAGCG ATCCATTAAA AGGCATATGG
CAGATACAAT TGACGGTTGA TGAATCTGTG GTGAAATTAG CAGAAACGCA TTTTGAGTTT
GACTTAGTCG GCCCTGCAGG ATTGTTGCTG CCTATCACCT TGCAAACCAT GACCAGTGCA
GATCAAATTT TATACTTACC TAAAGTGACT GAGTTTGGCA GTTATCGTGT TAAAGGCAGT
GCGGTTTCTA CGACGGTTGA TGGCCGAGAA ATTGTACTCA ATTTACCTGA AATGTTTTTT
AATTTAGTAG AGCCCCCAGC TCCACCTCCA TCAGTTGAAG AACTTGCTGA AAAAGCGGCT
ATTCAAGCAG AAATTGAAGA GAAAGTAGCT AAAGACGATG CAATGTTCTG GATTATTACC
ATTAATGGCG TACTCTTTTT TGTTGGTATT ATCGGTTTGG TGATATGGCG AAAAAAACAA
ACGCTGGCAA AGGCGATGGC TGCGGCAGAA GAAAGGTTAA AGCAAAACCC CGTTAATGAG
GATAAACCTA AAGACAGTAT TCTAGAAAGC GTCGACCTAG ATGATATTGA TTTAAGTATG
CCTGATGACA AAAACTAA
 
Protein sequence
MSATRAGYLA ILCLLLLSLI LAWQPNAQAA VVNASQAAEL KNRFRIDHMV DHLTLVIQRS 
YGSAPVVVIL PDGSKWYSNR HPQTVKWVDG IAADMIYIEK PMPGPWQLLG SVVEGSTIKK
LSALDIAVQP LPQPLYQGER LKVTARLLGD SLTMRMPGLE YMVEWTARFT SEHLPTDDNF
ATGTIIVGAY KDNGELLDEV PDDGIFTGSH NLQQPTGHYV LNVTARNNIF EREYVMPFEL
SPQPITVKMV PNSDPLKGIW QIQLTVDESV VKLAETHFEF DLVGPAGLLL PITLQTMTSA
DQILYLPKVT EFGSYRVKGS AVSTTVDGRE IVLNLPEMFF NLVEPPAPPP SVEELAEKAA
IQAEIEEKVA KDDAMFWIIT INGVLFFVGI IGLVIWRKKQ TLAKAMAAAE ERLKQNPVNE
DKPKDSILES VDLDDIDLSM PDDKN